Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0001
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X70799-1|CAA50069.1|  843|Drosophila melanogaster serin/threonin...    28   9.5  
BT015255-1|AAT94484.1| 1100|Drosophila melanogaster LP07621p pro...    28   9.5  
AE014298-2626|AAF48777.3|  908|Drosophila melanogaster CG7826-PA...    28   9.5  

>X70799-1|CAA50069.1|  843|Drosophila melanogaster
           serin/threonin-kinase protein.
          Length = 843

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 635 PPP--AGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNGCN 525
           PPP  A S +      S+N+I  +P  TG  NNN N  N
Sbjct: 561 PPPSLANSHHSTNSLGSLNHI--SPGSTGCHNNNSNSSN 597


>BT015255-1|AAT94484.1| 1100|Drosophila melanogaster LP07621p
           protein.
          Length = 1100

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 635 PPP--AGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNGCN 525
           PPP  A S +      S+N+I  +P  TG  NNN N  N
Sbjct: 818 PPPSLANSHHSTNSLGSLNHI--SPGSTGCHNNNSNSSN 854


>AE014298-2626|AAF48777.3|  908|Drosophila melanogaster CG7826-PA,
           isoform A protein.
          Length = 908

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 635 PPP--AGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNGCN 525
           PPP  A S +      S+N+I  +P  TG  NNN N  N
Sbjct: 626 PPPSLANSHHSTNSLGSLNHI--SPGSTGCHNNNSNSSN 662


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,469,789
Number of Sequences: 53049
Number of extensions: 380928
Number of successful extensions: 966
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)