Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2496
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 286 6e-78
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 280 5e-76
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 254 3e-68
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 254 3e-68
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 247 4e-66
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 237 3e-63
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 237 3e-63
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 233 6e-62
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 165 2e-41
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 161 2e-40
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 139 1e-33
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 139 1e-33
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 113 1e-25
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 108 2e-24
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 78 4e-15
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 78 4e-15
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 8.9
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 8.9
AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 27 8.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 286 bits (702), Expect = 6e-78
Identities = 134/163 (82%), Positives = 149/163 (91%), Gaps = 1/163 (0%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 419
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 420 SSMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDAG 548
SSMVL KMKETAEA+LG TV+ AV+TVPAYFNDSQRQA KDAG
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAG 163
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 280 bits (686), Expect = 5e-76
Identities = 131/163 (80%), Positives = 147/163 (90%), Gaps = 1/163 (0%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 419
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 420 SSMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDAG 548
SSMVL KMK+TAEA+L TV+ AV+TVP YFNDSQRQA KDAG
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAG 163
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 254 bits (622), Expect = 3e-68
Identities = 116/161 (72%), Positives = 137/161 (85%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 423 SMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDA 545
+MVL KMKETAE YLG TV+ AVITVPAYFNDSQRQA KDA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDA 161
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 254 bits (622), Expect = 3e-68
Identities = 116/161 (72%), Positives = 137/161 (85%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 423 SMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDA 545
+MVL KMKETAE YLG TV+ AVITVPAYFNDSQRQA KDA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDA 161
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 247 bits (605), Expect = 4e-66
Identities = 113/161 (70%), Positives = 136/161 (84%)
Frame = +3
Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422
NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 423 SMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDA 545
+MVL KMKETAEA LG +V+ AVITVPAYFNDSQRQA KDA
Sbjct: 121 AMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDA 161
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 237 bits (581), Expect = 3e-63
Identities = 110/158 (69%), Positives = 132/158 (83%), Gaps = 2/158 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 254
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 255 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 434
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 435 TKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDAG 548
KMKE AE+YLGK V+ AV+TVPAYFND+QRQA KDAG
Sbjct: 156 VKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAG 193
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 237 bits (581), Expect = 3e-63
Identities = 110/158 (69%), Positives = 132/158 (83%), Gaps = 2/158 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 254
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 255 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 434
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 435 TKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDAG 548
KMKE AE+YLGK V+ AV+TVPAYFND+QRQA KDAG
Sbjct: 156 VKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAG 193
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 233 bits (570), Expect = 6e-62
Identities = 109/158 (68%), Positives = 130/158 (82%), Gaps = 2/158 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 255 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 434
NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+MVL
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
Query: 435 TKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDAG 548
TKMK+ AE+YLG V+ AV+TVPAYFND+Q+QA KDAG
Sbjct: 153 TKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAG 190
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 165 bits (400), Expect = 2e-41
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 422
N NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVG 145
Query: 423 SMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDAG 548
+ VL KMKETAE+YLG TV AV+TVPAYFNDSQRQA KDAG
Sbjct: 146 AFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAG 187
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 161 bits (392), Expect = 2e-40
Identities = 85/162 (52%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Frame = +3
Query: 69 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 245
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 246 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 422
N NT+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVG 145
Query: 423 SMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDAG 548
+ VL KMKETAE+YLG TV V+TVPAYFNDSQRQA KDAG
Sbjct: 146 AFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAG 187
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 139 bits (336), Expect = 1e-33
Identities = 72/158 (45%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 255 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 431
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 432 LTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDA 545
L +K AE LG V+ AVITVPAYFN +QR+A ++A
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEA 158
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 139 bits (336), Expect = 1e-33
Identities = 72/158 (45%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 254
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 255 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 431
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 432 LTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDA 545
L +K AE LG V+ AVITVPAYFN +QR+A ++A
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEA 158
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 113 bits (271), Expect = 1e-25
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 8/166 (4%)
Frame = +3
Query: 54 KYKMAKAPA--VGIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIG 218
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 219 DAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKG 389
A Q NP TI+DAKR IGR FE + +D K +PF++ D GK ++
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDS 144
Query: 390 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQR 527
K +PEE+ S+++ +K A +LG T+ VI+ PA FN+ QR
Sbjct: 145 GTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQR 190
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 108 bits (260), Expect = 2e-24
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Frame = +3
Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 260
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
+ + K LIGRKF D Q + P +VV ++V+Y GE TF PE+V + +LT
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 438 KMKETAEAYLG--KTVQXAVITVPAYFNDSQRQAXKDA 545
K++ E+ L K V V+ VP+YF D QR+A A
Sbjct: 124 KLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSA 161
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 78.2 bits (184), Expect = 4e-15
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 8 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 419
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 68 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 125
Query: 420 SSMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDA 545
+M+L K+ EAY +TV+ VITVP + N ++R+A A
Sbjct: 126 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASA 167
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 78.2 bits (184), Expect = 4e-15
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Frame = +3
Query: 66 AKAPAVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 242
A A+ IDLG+ + +G+ + G ++I+ N + R TP+ ++F + ER +AA +
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 419
+P ++ +I RK D K +PF D + + YK E+K + E +
Sbjct: 84 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 141
Query: 420 SSMVLTKMKETAEAYLGKTVQXAVITVPAYFNDSQRQAXKDA 545
+M+L K+ EAY +TV+ VITVP + N ++R+A A
Sbjct: 142 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASA 183
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 67.7 bits (158), Expect = 5e-12
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +3
Query: 78 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 254
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 255 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 434
L+G+ + + + + F V D K + +K +++ E +++M+L
Sbjct: 86 LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMIL 145
Query: 435 TKMKETAEAYL-GKTVQXAVITVPAYFNDSQRQAXKDA 545
K+ E Y ++ VITVP YF ++R A + A
Sbjct: 146 ANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERA 183
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 170 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 265
D V+CCVH R S+ + Q+ D+ Q N+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54
>U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical
protein C33H5.10 protein.
Length = 348
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Frame = +2
Query: 50 LKIQNGKST--RSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRC 223
L IQ S R R +S H L P GG + G + S H H +
Sbjct: 241 LYIQKASSMDRRERTKSKQHPLSIMDAPKDRGGRTEEMVGVKQESFRQQQHTFDRQHSQN 300
Query: 224 RQEPGGDEPQQHNIRCQTSH 283
RQ+ D P+ H + H
Sbjct: 301 RQKSTFDRPKTHEEQVLEQH 320
>Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical
protein F52B5.5a protein.
Length = 644
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -3
Query: 488 CXLHSFAE--ISFGSFLHFRK-HHGTDFLGEKGFVFTLICY 375
C H+ E F SF + R H + EKG FTLI Y
Sbjct: 307 CRSHTEREQHFPFDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 169 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 65
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 371 DLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEY 261
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription
factor CEP-1 protein.
Length = 644
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = -3
Query: 488 CXLHSFAE--ISFGSFLHFRK-HHGTDFLGEKGFVFTLICY 375
C H+ E F SF + R H + EKG FTLI Y
Sbjct: 307 CRSHTEREQHFPFDSFFYIRNSEHEFSYSAEKGSTFTLIMY 347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,233,278
Number of Sequences: 27780
Number of extensions: 293328
Number of successful extensions: 875
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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