Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2492
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA...    75   1e-13
BT022280-1|AAY54696.1|  361|Drosophila melanogaster IP11380p pro...    29   6.8  
AY095512-1|AAM12246.1|  418|Drosophila melanogaster AT26524p pro...    29   6.8  
AE014298-2361|AAF48587.2|  355|Drosophila melanogaster CG9915-PA...    29   6.8  
AE014134-64|AAF51528.1|  443|Drosophila melanogaster CG13693-PA ...    29   6.8  
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P...    29   8.9  

>AE014134-2330|AAF53285.1|  803|Drosophila melanogaster CG9395-PA
           protein.
          Length = 803

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 50/137 (36%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
 Frame = +3

Query: 288 PIDAVWQPVAGTRFRFYVYSAYVEXXXXXXXXXXXXXXXX-GADPVICRLWLPDNR---- 452
           PID  WQ V GTRF+F+VYSAY +                 G + V CR W   +     
Sbjct: 242 PIDGAWQVVNGTRFKFFVYSAYFDRREGARLVRVVGATKTRGPERVWCRFWYGPSAGNGT 301

Query: 453 ------------TLTLKARVKAIRENWNLKYSATYVLCLLKDXGVKPQETVGGSISVIAS 596
                       + T+ ARVK IRENWNLKYSA ++LC ++     P  +V   +SV++ 
Sbjct: 302 DAGSSTARAKYSSATVMARVKIIRENWNLKYSACFILCPVR----TPPLSVPHFVSVVSR 357

Query: 597 ASPNRPPTNLLTILDTE 647
                PP NLLT+ +T+
Sbjct: 358 L--RAPPGNLLTLRNTD 372


>BT022280-1|AAY54696.1|  361|Drosophila melanogaster IP11380p
           protein.
          Length = 361

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 537 KDXGVKPQETVGGSISVIASASPNRPPTNLLTILDTE 647
           KD  ++P+ TV G +S      PNR   ++   LD++
Sbjct: 305 KDYVIRPKSTVEGEVSASTKRKPNRYEKHMKRFLDSK 341


>AY095512-1|AAM12246.1|  418|Drosophila melanogaster AT26524p
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 329 SVLR-LFGLRGTSDGSRGANNRSDKNARSRPRHLPLVAPRQPHADAQGPRQGYKRKLEFK 505
           S+LR L   RG++ GS G N+R   + RS P  +  +        A   R+G   KL FK
Sbjct: 113 SILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSIS-GISAPEKRRGMDYKLNFK 171

Query: 506 IQCNV 520
            +  +
Sbjct: 172 AKAEM 176


>AE014298-2361|AAF48587.2|  355|Drosophila melanogaster CG9915-PA
           protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 537 KDXGVKPQETVGGSISVIASASPNRPPTNLLTILDTE 647
           KD  ++P+ TV G +S      PNR   ++   LD++
Sbjct: 299 KDYVIRPKSTVEGEVSASTKRKPNRYEKHMKRFLDSK 335


>AE014134-64|AAF51528.1|  443|Drosophila melanogaster CG13693-PA
           protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 329 SVLR-LFGLRGTSDGSRGANNRSDKNARSRPRHLPLVAPRQPHADAQGPRQGYKRKLEFK 505
           S+LR L   RG++ GS G N+R   + RS P  +  +        A   R+G   KL FK
Sbjct: 113 SILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSIS-GISAPEKRRGMDYKLNFK 171

Query: 506 IQCNV 520
            +  +
Sbjct: 172 AKAEM 176


>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
            protein.
          Length = 5303

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 689  LHADVQCFLNSSLWFCVENREQVSRRSI 606
            L+AD    LNS+LW C++  E  +R  I
Sbjct: 2852 LYADQLLTLNSNLWHCLKTLESANRTEI 2879


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,429,591
Number of Sequences: 53049
Number of extensions: 738274
Number of successful extensions: 2436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)