Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2486
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 285 2e-77
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 138 3e-33
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 121 6e-28
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 117 8e-27
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 109 3e-24
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 107 8e-24
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 103 2e-22
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 37 0.013
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 31 0.87
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 31 0.87
U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal enha... 29 4.7
U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal enha... 29 4.7
AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal en... 29 4.7
AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical ... 29 4.7
AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine r... 29 4.7
U50308-5|AAG24033.2| 284|Caenorhabditis elegans Seven tm recept... 28 6.2
AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical ... 28 6.2
Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical ... 28 8.1
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 285 bits (699), Expect = 2e-77
Identities = 130/180 (72%), Positives = 154/180 (85%)
Frame = +3
Query: 102 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 281
MARRYD+RTTIFSPEGRLYQVEYAMEAISHAGT LGIL+++GI++AAER+N +KLLD+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 282 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 461
+EK+Y+L+D++ C+VAGIT+DAN+L N LR A Y YGE +P EQLV LC+ KQ
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQR 120
Query: 462 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 641
YTQ GGKRPFGVS+LY+GWDKHYGYQLYQSDPSGNY GWKATCIG+N AAV+ LKQEYK
Sbjct: 121 YTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYK 180
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 574 GGKQHASVTIVLQQFQV*NRSTRENETTLAEAQALAIKVLNKTLDM 711
G A+VT++ Q+++ N L EA+ LAIKVL KTLD+
Sbjct: 165 GSNHQAAVTLLKQEYKSPN---------LEEAKQLAIKVLWKTLDV 201
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 138 bits (335), Expect = 3e-33
Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
Frame = +3
Query: 102 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 281
M Y T FSP G+L Q+EYA+ A+ + S+G+ A DG++LA E N +L +
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE--NVGSVLTDD- 57
Query: 282 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 461
K+ +++ + C +G+ D +L + R IA Y + YGE +P QLV+ + V Q
Sbjct: 58 -QPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQE 116
Query: 462 YTQYGGKRPFGVSILYMGWDKHYGYQ-LYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY 638
YTQ GG RPFG S+L GWDK+ G L+Q DPSG Y WKAT +G N A + L++ +
Sbjct: 117 YTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRF 176
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 121 bits (291), Expect = 6e-28
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = +3
Query: 111 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 290
RYD TIFSP+G L+QVEYA EA+ T++G+ D I++ E+++ L D+
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTI-R 61
Query: 291 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 470
KI+ ++D ++ + AG+++DA VL + R+ Q Y L + + + ++ + KQ +TQ
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 471 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY 638
G+RPFG+S+L G+D +L++++PSG Y + A G L+++Y
Sbjct: 122 SPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQY 177
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 117 bits (282), Expect = 8e-27
Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 4/179 (2%)
Frame = +3
Query: 114 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 293
YD FSPEGRL+QVEYA+EA+ TS+GI ++G+LLAAE+R+T+KL+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI-EK 66
Query: 294 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAY--- 464
I K++ + + AG+ +D+ L ++ AQ + Y I E + + ++ +
Sbjct: 67 ISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDD 126
Query: 465 -TQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY 638
+ RPFGV++L+ G D+ G +L+ DPSG + KA IG S A +LK++Y
Sbjct: 127 DVKASMSRPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQY 184
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 109 bits (261), Expect = 3e-24
Identities = 64/187 (34%), Positives = 102/187 (54%)
Frame = +3
Query: 111 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 290
+YD T++SP+GRL+QVEYA+EA+ ++GI + ++ A +R N L +
Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSH---QK 61
Query: 291 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 470
K+Y+++ S+AG+ SD +L L+ + Y +++P ++L + QA TQ
Sbjct: 62 KVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQ 121
Query: 471 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKGK* 650
Y G+RPFGV IL G+DK G + Q+DPS T IG S +A + L++
Sbjct: 122 YYGRRPFGVGILIAGYDKD-GAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNV---- 176
Query: 651 DNSGRST 671
DN +ST
Sbjct: 177 DNFEKST 183
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 107 bits (257), Expect = 8e-24
Identities = 56/179 (31%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
Frame = +3
Query: 114 YDTRTTIFSPEGRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLLDEVFFSE 290
+D TIFSPEGR+YQVEYA +AI+ T++ + D ++A ++R + L+ +
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 291 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 470
+Y+++ + C G+ DA + A + + G +PCE L + D+ Q YTQ
Sbjct: 69 -VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQ 127
Query: 471 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKGK 647
R G ++L++ +D G ++Y+ DP+G Y G K +G A S L+++ K K
Sbjct: 128 NAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKK 186
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 103 bits (246), Expect = 2e-22
Identities = 53/173 (30%), Positives = 99/173 (57%)
Frame = +3
Query: 114 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 293
YD + FSP+GR++QVEYA +A+ +AGT + I +G+++ A++ ++KL + + +
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTD-NANPR 66
Query: 294 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQY 473
++ +ND++ +VAG D L N A ++L Y E +P + + + + + +T
Sbjct: 67 MFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-L 125
Query: 474 GGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQ 632
G RPFG +M W+K G +L+ +PSG +KA +G + AA + +++
Sbjct: 126 GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK 178
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 37.1 bits (82), Expect = 0.013
Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 2/160 (1%)
Frame = +3
Query: 168 YAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAGITSD 347
Y E IS T + + G+++ + R + + KI + D+MV +G +D
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 348 ANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ--YGGKRPFGVSILYMGWD 521
+ + + Y + + + + Q + Q Y + S+L GWD
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRS-------SQIFRQFLYNYREQLSASVLVAGWD 127
Query: 522 KHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 641
+ G Q+Y G ++T G+ S L +++
Sbjct: 128 EELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWR 167
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 31.1 bits (67), Expect = 0.87
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 168 YAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFF-SEKIYKLNDDMVCSVAGITS 344
Y+ME G++ I + ++A++ R T ++ + +EKI LND+++ + +G
Sbjct: 47 YSMEG----GSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYG 102
Query: 345 DANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDK 524
D VL +L+ + Q L +Y + V ++ Y P+ + G D+
Sbjct: 103 D--VL--QLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDE 158
Query: 525 HYGYQLYQSDPSG 563
H ++ DP G
Sbjct: 159 HGKGAVFSYDPIG 171
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 31.1 bits (67), Expect = 0.87
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 168 YAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFF-SEKIYKLNDDMVCSVAGITS 344
Y+ME G++ I + ++A++ R T ++ + +EKI LND+++ + +G
Sbjct: 47 YSMEG----GSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYG 102
Query: 345 DANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDK 524
D VL +L+ + Q L +Y + V ++ Y P+ + G D+
Sbjct: 103 D--VL--QLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDE 158
Query: 525 HYGYQLYQSDPSG 563
H ++ DP G
Sbjct: 159 HGKGAVFSYDPIG 171
>U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform b protein.
Length = 169
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 447 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 590
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 49 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 88
>U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 447 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 590
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 49 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 88
>AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal
enhancer binding protein-1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 447 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 590
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 47 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 86
>AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical
protein R13D11.10 protein.
Length = 79
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 513 GWDKHYGYQLYQSDPSGNYGGWKATCIG 596
GW GY Y P G YGGW +G
Sbjct: 38 GWGGRGGYGGYGYRPYGGYGGWGGRGMG 65
>AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein44 protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = -1
Query: 615 LLQHYCYRCMLLS----TPHSFHWDQTG 544
L+ H+ YR +++S T H FHW TG
Sbjct: 109 LMSHFIYRYLVISDSSLTRHHFHWFMTG 136
>U50308-5|AAG24033.2| 284|Caenorhabditis elegans Seven tm receptor
protein 94 protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 161 LIQTTFRREYGCTGIITSCHFLYKYILFV 75
+I T+ YG T ++ + HF+Y+YI +
Sbjct: 89 IIIPTYCTSYGLTLVLLAIHFVYRYIAMI 117
>AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical
protein Y37H2C.4 protein.
Length = 283
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 176 HSIFDLIQTTFRREYGCTGIITSCHFLYKY 87
H I ++ T + YG + + +CHF+Y+Y
Sbjct: 42 HDITLVLLTVYSSCYGSSMSVFACHFIYRY 71
>Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical
protein C50C10.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 194 RMTYSFHSIFDLIQTTFRREYGCTGIITSCHFLYKY 87
R FH I + + +G + I +CHF+Y+Y
Sbjct: 79 RKDQHFHLISQFMAVNYCSFFGFSLAIIACHFIYRY 114
>AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical
protein Y17D7B.1 protein.
Length = 397
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -1
Query: 603 YC--YRCMLLSTPHSFHWDQTGRADNH-SAYPSPYTELRLQRAFYLHIVCKLVSHHKARR 433
YC Y + PH+F G+ + PY EL L +I+C++V ++ RR
Sbjct: 255 YCVDYSHVWSQGPHTFENVFGGKMIRYFDIIVKPYLELNLSETEVTYILCQIVWNYAGRR 314
Query: 432 L 430
L
Sbjct: 315 L 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,894
Number of Sequences: 27780
Number of extensions: 415662
Number of successful extensions: 1162
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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