Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2484
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z21943-1|CAA79937.1|  706|Homo sapiens zinc finger protein protein.    32   2.0  
U00115-1|AAC50054.1|  706|Homo sapiens zinc-finger protein protein.    32   2.0  
BC150184-1|AAI50185.1|  706|Homo sapiens B-cell CLL/lymphoma 6 (...    32   2.0  
BC142705-1|AAI42706.1|  706|Homo sapiens B-cell CLL/lymphoma 6 (...    32   2.0  

>Z21943-1|CAA79937.1|  706|Homo sapiens zinc finger protein protein.
          Length = 706

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 271 SRSSLLIQTHGTPASNLSFDKKICT-KYIKYILCNAKNCNATP 146
           S+++ ++Q  G+P +    D K C  K  K+I+ N+ N NA P
Sbjct: 350 SKNACILQASGSPPAKSPTDPKACNWKKYKFIVLNSLNQNAKP 392


>U00115-1|AAC50054.1|  706|Homo sapiens zinc-finger protein protein.
          Length = 706

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 271 SRSSLLIQTHGTPASNLSFDKKICT-KYIKYILCNAKNCNATP 146
           S+++ ++Q  G+P +    D K C  K  K+I+ N+ N NA P
Sbjct: 350 SKNACILQASGSPPAKSPTDPKACNWKKYKFIVLNSLNQNAKP 392


>BC150184-1|AAI50185.1|  706|Homo sapiens B-cell CLL/lymphoma 6
           (zinc finger protein 51) protein.
          Length = 706

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 271 SRSSLLIQTHGTPASNLSFDKKICT-KYIKYILCNAKNCNATP 146
           S+++ ++Q  G+P +    D K C  K  K+I+ N+ N NA P
Sbjct: 350 SKNACILQASGSPPAKSPTDPKACNWKKYKFIVLNSLNQNAKP 392


>BC142705-1|AAI42706.1|  706|Homo sapiens B-cell CLL/lymphoma 6
           (zinc finger protein 51) protein.
          Length = 706

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 271 SRSSLLIQTHGTPASNLSFDKKICT-KYIKYILCNAKNCNATP 146
           S+++ ++Q  G+P +    D K C  K  K+I+ N+ N NA P
Sbjct: 350 SKNACILQASGSPPAKSPTDPKACNWKKYKFIVLNSLNQNAKP 392


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,558,639
Number of Sequences: 237096
Number of extensions: 1463044
Number of successful extensions: 2638
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2634
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)