Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2482
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein. 31 3.6
AK131379-1|BAD18530.1| 851|Homo sapiens protein ( Homo sapiens ... 31 3.6
L02320-1|AAA36541.1| 583|Homo sapiens radixin protein. 30 6.2
BX000688-10|CAI18605.1| 899|Homo sapiens gamma-aminobutyric aci... 30 6.2
BX000688-9|CAI18606.1| 961|Homo sapiens gamma-aminobutyric acid... 30 6.2
BX000688-8|CAI18604.1| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
BC050532-1|AAH50532.2| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein. 30 6.2
BC042598-1|AAH42598.1| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
BC041332-1|AAH41332.1| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
AL662826-10|CAI17391.2| 899|Homo sapiens gamma-aminobutyric aci... 30 6.2
AL662826-9|CAI17390.1| 961|Homo sapiens gamma-aminobutyric acid... 30 6.2
AL662826-8|CAI17389.1| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
AL645936-9|CAI18016.1| 899|Homo sapiens gamma-aminobutyric acid... 30 6.2
AL645936-8|CAI18017.1| 961|Homo sapiens gamma-aminobutyric acid... 30 6.2
AL645936-7|CAI18015.1| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
AL031983-8|CAA21453.1| 961|Homo sapiens gamma-aminobutyric acid... 30 6.2
AL031983-7|CAA21454.1| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
AK223619-1|BAD97339.1| 844|Homo sapiens gamma-aminobutyric acid... 30 6.2
AJ225029-1|CAA12360.1| 844|Homo sapiens GABA-B receptor protein. 30 6.2
AJ225028-1|CAA12359.1| 961|Homo sapiens GABA-B receptor protein. 30 6.2
AJ012288-1|CAA09980.1| 961|Homo sapiens GABA-BR1 protein. 30 6.2
AJ012187-1|CAA09941.1| 899|Homo sapiens GABAB receptor, subunit... 30 6.2
AJ012186-1|CAA09940.1| 844|Homo sapiens GABAB receptor, subunit... 30 6.2
AJ012185-1|CAA09939.1| 961|Homo sapiens GABAB receptor, subunit... 30 6.2
AF099148-1|AAC98508.1| 961|Homo sapiens GABA-B1a receptor protein. 30 6.2
AB208790-1|BAD92027.1| 808|Homo sapiens gamma-aminobutyric acid... 30 6.2
AB065476-1|BAC05730.1| 866|Homo sapiens seven transmembrane hel... 30 6.2
>U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.
Length = 1663
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPPQVDFNGNIYKFIKT 328
+TE+A +R+ L++ + ++ + +I +L +H++FG DF+ NI F+K
Sbjct: 1291 QTEKAYVRD-LHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNNI--FLKE 1347
Query: 329 RVQWDQ 346
+++Q
Sbjct: 1348 LEKYEQ 1353
>AK131379-1|BAD18530.1| 851|Homo sapiens protein ( Homo sapiens
cDNA FLJ16443 fis, clone BRAMY3004800, highly similar
to Huntingtin-associated protein-interacting protein. ).
Length = 851
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/66 (25%), Positives = 37/66 (56%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPPQVDFNGNIYKFIKT 328
+TE+A +R+ L++ + ++ + +I +L +H++FG DF+ NI F+K
Sbjct: 637 QTEKAYVRD-LHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNNI--FLKE 693
Query: 329 RVQWDQ 346
+++Q
Sbjct: 694 LEKYEQ 699
>L02320-1|AAA36541.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 158 EAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQ 280
+ +L +L + T K L LEEA K E+ +WQH F Q
Sbjct: 414 QEQLAAELAEFTAKIAL-LEEAKKKKEEEATEWQHKAFAAQ 453
>BX000688-10|CAI18605.1| 899|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 899
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 822 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 867
>BX000688-9|CAI18606.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>BX000688-8|CAI18604.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>BC050532-1|AAH50532.2| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 158 EAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQ 280
+ +L +L + T K L LEEA K E+ +WQH F Q
Sbjct: 414 QEQLAAELAEFTAKIAL-LEEAKKKKEEEATEWQHKAFAAQ 453
>BC042598-1|AAH42598.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>BC041332-1|AAH41332.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>AL662826-10|CAI17391.2| 899|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 899
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 822 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 867
>AL662826-9|CAI17390.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>AL662826-8|CAI17389.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>AL645936-9|CAI18016.1| 899|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 899
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 822 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 867
>AL645936-8|CAI18017.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>AL645936-7|CAI18015.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>AL031983-8|CAA21453.1| 961|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>AL031983-7|CAA21454.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor, 1 protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>AK223619-1|BAD97339.1| 844|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor 1 isoform b precursor variant protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>AJ225029-1|CAA12360.1| 844|Homo sapiens GABA-B receptor protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>AJ225028-1|CAA12359.1| 961|Homo sapiens GABA-B receptor protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>AJ012288-1|CAA09980.1| 961|Homo sapiens GABA-BR1 protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>AJ012187-1|CAA09941.1| 899|Homo sapiens GABAB receptor, subunit 1c
protein.
Length = 899
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 822 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 867
>AJ012186-1|CAA09940.1| 844|Homo sapiens GABAB receptor, subunit 1b
protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 767 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 812
>AJ012185-1|CAA09939.1| 961|Homo sapiens GABAB receptor, subunit 1a
protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>AF099148-1|AAC98508.1| 961|Homo sapiens GABA-B1a receptor protein.
Length = 961
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 884 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 929
>AB208790-1|BAD92027.1| 808|Homo sapiens gamma-aminobutyric acid
(GABA) B receptor 1 isoform c precursor variant protein.
Length = 808
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 731 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 776
>AB065476-1|BAC05730.1| 866|Homo sapiens seven transmembrane helix
receptor protein.
Length = 866
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 149 ETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPP 286
E E++ L EK N+E +K I EE +++ L Q L PP
Sbjct: 744 EEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPP 789
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,121,536
Number of Sequences: 237096
Number of extensions: 1992094
Number of successful extensions: 3441
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3441
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -