Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2474
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 272 2e-73
U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna synt... 138 3e-33
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr... 65 5e-11
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 64 7e-11
AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical... 37 0.016
AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRN... 37 0.016
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical pr... 31 0.60
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 31 0.60
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 31 0.60
AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA s... 31 0.60
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 31 1.0
Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 30 1.8
Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical p... 29 3.2
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p... 29 3.2
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 4.2
AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical ... 28 5.6
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68880-4|CAA93093.1| 544|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 28 7.4
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 9.8
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 272 bits (666), Expect = 2e-73
Identities = 122/210 (58%), Positives = 150/210 (71%), Gaps = 2/210 (0%)
Frame = +1
Query: 22 HEKTWYHWMENIRDWCISRQLWWGHRIPAYKVSLPAAHQHK--EEELWVSGHTQEEALAK 195
H+ TW W+E+ RDWCISRQLWWGHRIPAY +S + EE WVS T++EALAK
Sbjct: 487 HKATWNRWLESSRDWCISRQLWWGHRIPAYYISFADGREQPLPEENYWVSARTEQEALAK 546
Query: 196 AVSKFGVSASEVTLRQDDDVLDTWFSSGLFTFSIFGWPDETDDLKAFYPGTLLETGHDIL 375
A KF V +E+ L+ D+DVLDTWFSSG++ F++FGWPD T D+ F+PG +LETGHDIL
Sbjct: 547 AAQKFQVPEAEILLKWDEDVLDTWFSSGMWPFAVFGWPDATKDMDLFFPGAVLETGHDIL 606
Query: 376 FFWVARMVFFGQRLMGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPVDVVXGVTPRGVA 555
FFWVARMVF Q L GKLPFKE+ LH M+RDAHGRKMSKSLGNVIDP+DV+ G++ +
Sbjct: 607 FFWVARMVFMAQELTGKLPFKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGISLNDLQ 666
Query: 556 PPTGRLELGPRGEVEKAKQGQKPDYSHXHP 645
L + E+ AK+GQ DY P
Sbjct: 667 AQLLGGNLDEK-EIAVAKEGQARDYPDGIP 695
>U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna
synthetase protein 1 protein.
Length = 918
Score = 138 bits (335), Expect = 3e-33
Identities = 81/171 (47%), Positives = 99/171 (57%), Gaps = 5/171 (2%)
Frame = +1
Query: 43 WMENIRDWCISRQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALAKAVSKFGVSA 222
W EN WC+SRQLWWGHRIPAY V P + W+ +EEA + K
Sbjct: 384 WFENQEPWCLSRQLWWGHRIPAYNV--PG------QSKWMVTTDEEEARRELGDK----- 430
Query: 223 SEVTLRQDDDVLDTWFSSGLFTFSIFGW----PDETDDLKAFYPGTLLETGHDILFFWVA 390
++QD DVLDTWFSS L GW P +T L ++ETG DI FWVA
Sbjct: 431 ----MQQDPDVLDTWFSSALVPLVKNGWLEGAPIQTPSLN------VMETGWDISGFWVA 480
Query: 391 RMVFFGQRLM-GKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPVDVVXGVT 540
RM+ +L G+ PF +V LH +VRD GRKMSKSLGNVIDP+DV+ G+T
Sbjct: 481 RMIALNMKLSSGETPFGKVVLHGLVRDNEGRKMSKSLGNVIDPLDVLDGIT 531
>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical
protein R11A8.6 protein.
Length = 1141
Score = 64.9 bits (151), Expect = 5e-11
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Frame = +1
Query: 19 VHEKTWYHWMENIRDWCISRQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALA-- 192
V EK + +W+ + RDW +SR +WG I + + EE + V + E L+
Sbjct: 441 VKEKRFANWLRDARDWAVSRNRFWGTPINLW------VSEDGEEVVCVGSIAELEELSGQ 494
Query: 193 KAVSKFGVSASEVT---------LRQDDDVLDTWFSSGLFTFSIFGWPDETDDL-KAFYP 342
K S +VT L++ +V D WF SG ++ +P E + + +P
Sbjct: 495 KITDLHRESVDDVTIPSRSGRGVLKRVSEVFDCWFESGSMPYAQNHYPFENRKIFEDNFP 554
Query: 343 GTLLETGHDILFFWVARMVFFGQRLMGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPVD 522
+ G D W ++ L K PFK + + +V + G KMSKS N DP+
Sbjct: 555 ADFIAEGIDQTRGWFYTLLVLSTALFNKPPFKNLICNGLVLASDGAKMSKSKKNYPDPML 614
Query: 523 VV 528
+V
Sbjct: 615 IV 616
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical protein
C25A1.7 protein.
Length = 970
Score = 64.5 bits (150), Expect = 7e-11
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Frame = +1
Query: 58 RDWCISRQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALAKAVSKFGVSA----- 222
+ WCISRQ WG IPA ++ ++ WV+ T+E + V
Sbjct: 506 KSWCISRQRVWGTPIPALVDDNGGSYTSRKLIEWVAKLTRERENTDVWWEIDVKEILENE 565
Query: 223 ---------SEVT--LRQDDDVLDTWFSSGLFTFSIFGWPDETD-DLKAFYPGTLLETGH 366
S++ L+++ D++D W SGL W D D + + ++ G
Sbjct: 566 EVRRSLEIPSDIVSQLKKNTDIMDVWLDSGL------AWHAARDNDTEREHVADVVLEGV 619
Query: 367 DILFFWVARMVFFGQRLMGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPVDVVXG 534
D W ++ + KLP+K++ +H D + KMSKS+GNV+DP + G
Sbjct: 620 DQFRGWFQSLLLTSVAVQNKLPYKKIIVHGFCIDENNNKMSKSIGNVVDPTMLTDG 675
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 64.5 bits (150), Expect = 7e-11
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Frame = +1
Query: 58 RDWCISRQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALAKAVSKFGVSA----- 222
+ WCISRQ WG IPA ++ ++ WV+ T+E + V
Sbjct: 506 KSWCISRQRVWGTPIPALVDDNGGSYTSRKLIEWVAKLTRERENTDVWWEIDVKEILENE 565
Query: 223 ---------SEVT--LRQDDDVLDTWFSSGLFTFSIFGWPDETD-DLKAFYPGTLLETGH 366
S++ L+++ D++D W SGL W D D + + ++ G
Sbjct: 566 EVRRSLEIPSDIVSQLKKNTDIMDVWLDSGL------AWHAARDNDTEREHVADVVLEGV 619
Query: 367 DILFFWVARMVFFGQRLMGKLPFKEVYLHPMVRDAHGRKMSKSLGNVIDPVDVVXG 534
D W ++ + KLP+K++ +H D + KMSKS+GNV+DP + G
Sbjct: 620 DQFRGWFQSLLLTSVAVQNKLPYKKIIVHGFCIDENNNKMSKSIGNVVDPTMLTDG 675
>AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical
protein Y105E8A.20 protein.
Length = 406
Score = 36.7 bits (81), Expect = 0.016
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = +1
Query: 133 HQHKEEELWVSGHTQEEALAKAVSKFGVSASEVTLRQDDDVLDTWFSSGLFTFSIFGWPD 312
H K + L ++ E L+ + S+ +S + W + + ++ G+P+
Sbjct: 83 HPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDALVNYLTVTGFPN 142
Query: 313 ETDDLKAFYPGTLLETGHDI----LFFWVARMVFFGQRLMGKLPFKEVYLHPMVRDAHGR 480
++ +P T G DI L++W A ++ G L K+ ++ H ++ +
Sbjct: 143 A----QSVWPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKV---FIHGHWLIDNV--- 192
Query: 481 KMSKSLGNVIDPVDVVXGVTPRGV 552
KMSKSLGNV++P + + T G+
Sbjct: 193 KMSKSLGNVVNPSEAITKFTAEGL 216
>AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRNA
synthetase (mitochondrial)protein.
Length = 500
Score = 36.7 bits (81), Expect = 0.016
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = +1
Query: 133 HQHKEEELWVSGHTQEEALAKAVSKFGVSASEVTLRQDDDVLDTWFSSGLFTFSIFGWPD 312
H K + L ++ E L+ + S+ +S + W + + ++ G+P+
Sbjct: 177 HPSKYKSLALTSLEMSEDLSISRSRSRLSWGIPVPNDPTQTIYVWLDALVNYLTVTGFPN 236
Query: 313 ETDDLKAFYPGTLLETGHDI----LFFWVARMVFFGQRLMGKLPFKEVYLHPMVRDAHGR 480
++ +P T G DI L++W A ++ G L K+ ++ H ++ +
Sbjct: 237 A----QSVWPPTCQVIGKDITKFHLYYWPAFLMAAGLSLPQKV---FIHGHWLIDNV--- 286
Query: 481 KMSKSLGNVIDPVDVVXGVTPRGV 552
KMSKSLGNV++P + + T G+
Sbjct: 287 KMSKSLGNVVNPSEAITKFTAEGL 310
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 438 FERQLPHETLSEEHHPGHPEE 376
F+R++ E HHPGHPEE
Sbjct: 247 FQRKVDRRRHRESHHPGHPEE 267
>Z73912-3|CAE18063.1| 828|Caenorhabditis elegans Hypothetical
protein ZK524.3b protein.
Length = 828
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +1
Query: 37 YHWMENIRDWCISRQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALAKAVSKFGV 216
Y + DW +SRQ WG IP + + +L V G + + + K +FG
Sbjct: 351 YETSRTLTDWVVSRQRGWGTPIPMIQTKDGKRVAVQLNKLPVLGSDRGQEVDK--ERFGE 408
Query: 217 SASEVTLRQDDDVLDTWFSSGLF 285
S D D LDT+F S +
Sbjct: 409 SGV-----FDTDTLDTFFDSAWY 426
>Z73912-2|CAA98144.4| 859|Caenorhabditis elegans Hypothetical
protein ZK524.3a protein.
Length = 859
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +1
Query: 37 YHWMENIRDWCISRQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALAKAVSKFGV 216
Y + DW +SRQ WG IP + + +L V G + + + K +FG
Sbjct: 382 YETSRTLTDWVVSRQRGWGTPIPMIQTKDGKRVAVQLNKLPVLGSDRGQEVDK--ERFGE 439
Query: 217 SASEVTLRQDDDVLDTWFSSGLF 285
S D D LDT+F S +
Sbjct: 440 SGV-----FDTDTLDTFFDSAWY 457
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 438 FERQLPHETLSEEHHPGHPEE 376
F+R++ E HHPGHPEE
Sbjct: 247 FQRKVDRRRHRESHHPGHPEE 267
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Frame = +3
Query: 420 GEAAFQRGIPPPDGPRRSRPEDVQVAGQRHRPGGRG------ARSHPSRSCTANWKTRTW 581
G + G+ P R+R V+ +G +P GR R PS+S + + RT
Sbjct: 108 GNDSQMSGVRAPPVTPRNRQRSVRPSGSNAQPSGRAQPDYRDTRQRPSQSRDRSKQNRTG 167
Query: 582 TPRGSGE 602
TP G+ E
Sbjct: 168 TPHGAEE 174
>AB096633-1|BAC76733.1| 828|Caenorhabditis elegans leucyl-tRNA
synthetase (mitochondrial)protein.
Length = 828
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +1
Query: 37 YHWMENIRDWCISRQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALAKAVSKFGV 216
Y + DW +SRQ WG IP + + +L V G + + + K +FG
Sbjct: 351 YETSRTLTDWVVSRQRGWGTPIPMIQTKDGKRVAVQLNKLPVLGSDRGQEVDK--ERFGE 408
Query: 217 SASEVTLRQDDDVLDTWFSSGLF 285
S D D LDT+F S +
Sbjct: 409 SGV-----FDTDTLDTFFDSAWY 426
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 441 GIPPPDGPRRSRPEDVQVAGQRHRPGGRGARSHPSRSCTANWKTRTWTPRGSG-EGEART 617
G P P GPR + E + G + PG G + HP ++ + P G EG
Sbjct: 217 GRPGPQGPRGQQGEPGK-DGSKGNPGDEGRQGHPGKNGRTGAHGKDGAPGKCGKEGPIGP 275
Query: 618 EAGLFPPASR 647
+AG SR
Sbjct: 276 DAGYCQCPSR 285
>Z71177-3|CAA94869.1| 325|Caenorhabditis elegans Hypothetical
protein AC3.6 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +3
Query: 438 RGIPP-PDG--PRRSRPEDVQVAGQRHRPGGRGARSHPSR 548
RG PP PDG P P G+ +PGG G HP R
Sbjct: 231 RGGPPGPDGGYPMSGEPGSSGPQGKAGQPGGPGVDGHPGR 270
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = +3
Query: 387 GQDGVLRTTSHGEAAFQRGIPPPDGPRRSRPEDVQ-----VAGQRHRPGGRGARSHP 542
GQ G H E + Q G P P GP + VQ +G +PG GA+ P
Sbjct: 111 GQPGAQGEQGHVEVSGQPGAPRPQGPAGGPGQPVQSGGSGASGAPGQPGQAGAQGTP 167
>Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.18 protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 133 HQHKEEELWVSGHTQEEALAKAVSKFGVSASEVTLRQDDDVLDTWFSSGLFTFSIFGWPD 312
+Q+ E ELWV+GH+ A+A + + V + T Q V +G + +++ W D
Sbjct: 189 YQYPEYELWVTGHSLGGAIASIAASYVVHSGLYTGDQVKLVTMGQPRTGDYDYAV--WHD 246
Query: 313 ET 318
+T
Sbjct: 247 KT 248
>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 599 STSPRGPSSSLPVGGATPRGVTPXTTSTGSMTLPS 495
S +P PS + P+G TP G TP T+ M P+
Sbjct: 346 SFTPSHPSQT-PIGAMTPGGATPIGTAAMGMKTPA 379
>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
protein T08A11.2 protein.
Length = 1322
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 599 STSPRGPSSSLPVGGATPRGVTPXTTSTGSMTLPS 495
S +P PS + P+G TP G TP T+ M P+
Sbjct: 346 SFTPSHPSQT-PIGAMTPGGATPIGTAAMGMKTPA 379
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 626 SGFCPCFAFSTSPRGPSSSLPVGGATPRGVTPXTTSTGSMT 504
+G P AF +P G S+ VGGA P G + T G+ T
Sbjct: 157 TGASPMTAFGGAPTGASTMTAVGGA-PTGASTMTAVGGAPT 196
>AF038615-2|AAB94145.1| 782|Caenorhabditis elegans Hypothetical
protein R02D3.4 protein.
Length = 782
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 458 WSATLTAGRCPSRWATSSTRWTWCXESPLEELHRQLED 571
+ T+ G + T WTWC E + E+HR L D
Sbjct: 26 FDVTIREGPKQKKLQFEKTIWTWCLEG-IFEMHRILSD 62
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 99 PVSPPQLTGDAPVSNVLHP 43
P + P L DAP+S++LHP
Sbjct: 82 PFARPSLRDDAPLSSILHP 100
>Z68880-4|CAA93093.1| 544|Caenorhabditis elegans Hypothetical
protein T14G10.7 protein.
Length = 544
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +1
Query: 76 RQLWWGHRIPAYKVSLPAAHQHKEEELWVSGHTQEEALAKAVSKFGVSASEVT 234
++L W A + H H+ E+ ++E A+A+ KF E+T
Sbjct: 241 KRLVWDSAPLATNYHIQVIHLHENSEITPESLKEQEKTARALRKFAEKVKEIT 293
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2
Query: 99 PVSPPQLTGDAPVSNVLHP 43
P + P L DAP+S++LHP
Sbjct: 82 PFARPSLRDDAPLSSILHP 100
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 9.8
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = -3
Query: 593 SPRGPSSSLPVGGATPRG--VTPXTTSTGSMTLPSDLDIFRP*ASRTIGWRYTSLKGSFP 420
S R +SS+ +TP ++P ++ ++ PS + + T+ +S S P
Sbjct: 567 SSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTT--TTATVA-PTSSTVPSTP 623
Query: 419 MRRCPKNTILATQKNKMSWPVSNRVPG*NAFKSSVSSGHPNMEKVKSPDE 270
+ TI +T KN S P + V NA S SS HP+ E +SP +
Sbjct: 624 VSNVMAATISSTAKNTPS-PAGS-VTTINATFSKPSSRHPSEEVYRSPSQ 671
>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
protein ZK675.1 protein.
Length = 1405
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3
Query: 611 CFAFSTSPRGPSSSLPVGGATPRGVTPXTTSTGSMTLPSDLD 486
CF + GP SLP P G+ + S G M SD D
Sbjct: 287 CFWEGSKALGPHPSLPKSSLGPLGMLLSSLSDGDMIRWSDFD 328
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 9.8
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = -3
Query: 593 SPRGPSSSLPVGGATPRG--VTPXTTSTGSMTLPSDLDIFRP*ASRTIGWRYTSLKGSFP 420
S R +SS+ +TP ++P ++ ++ PS + + T+ +S S P
Sbjct: 567 SSRSSTSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTTT--TTATVA-PTSSTVPSTP 623
Query: 419 MRRCPKNTILATQKNKMSWPVSNRVPG*NAFKSSVSSGHPNMEKVKSPDE 270
+ TI +T KN S P + V NA S SS HP+ E +SP +
Sbjct: 624 VSNVMAATISSTAKNTPS-PAGS-VTTINATFSKPSSRHPSEEVYRSPSQ 671
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,098,220
Number of Sequences: 27780
Number of extensions: 329030
Number of successful extensions: 1386
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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