Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2470
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089633-1|AAL90371.1| 129|Drosophila melanogaster RE50273p pro... 160 2e-39
AL033125-9|CAA21832.1| 129|Drosophila melanogaster EG:EG0007.11... 160 2e-39
AE014298-598|AAF45920.1| 129|Drosophila melanogaster CG4944-PB,... 160 2e-39
AE014298-597|AAF45919.1| 129|Drosophila melanogaster CG4944-PA,... 160 2e-39
AE014298-599|AAN09116.1| 97|Drosophila melanogaster CG4944-PC,... 91 1e-18
AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein. 31 2.0
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 31 2.0
AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA... 31 2.0
AE014134-2150|AAF53159.2| 270|Drosophila melanogaster CG14947-P... 30 3.5
AY058405-1|AAL13634.1| 633|Drosophila melanogaster GH17657p pro... 29 4.6
AE013599-2281|AAF57997.1| 633|Drosophila melanogaster CG7848-PA... 29 4.6
>AY089633-1|AAL90371.1| 129|Drosophila melanogaster RE50273p
protein.
Length = 129
Score = 160 bits (388), Expect = 2e-39
Identities = 75/111 (67%), Positives = 88/111 (79%)
Frame = +3
Query: 117 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNP 296
KSQLEGFN L++ T EKI+LP+AEDV KTQ+S+F+GI F+ + LKHTET EKNP
Sbjct: 19 KSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQNNLKHTETNEKNP 78
Query: 297 XPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 449
PDK+AIE EKEKN+F+ GIENFD KLKHTET EKN LPTK+VIE EK A
Sbjct: 79 LPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEKQA 129
Score = 72.1 bits (169), Expect = 7e-13
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +3
Query: 186 PSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNPXPDKDAIEAEKEKNKFLNGIENF 365
P+ +D+ K ++L +E F+ +LK+ TQEK P + + AEK + GI F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 366 DPTKLKHTETCEKNPLPTKDVIEQEK 443
+ LKHTET EKNPLP K+ IEQEK
Sbjct: 64 NQNNLKHTETNEKNPLPDKEAIEQEK 89
>AL033125-9|CAA21832.1| 129|Drosophila melanogaster EG:EG0007.11
protein.
Length = 129
Score = 160 bits (388), Expect = 2e-39
Identities = 75/111 (67%), Positives = 88/111 (79%)
Frame = +3
Query: 117 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNP 296
KSQLEGFN L++ T EKI+LP+AEDV KTQ+S+F+GI F+ + LKHTET EKNP
Sbjct: 19 KSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQNNLKHTETNEKNP 78
Query: 297 XPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 449
PDK+AIE EKEKN+F+ GIENFD KLKHTET EKN LPTK+VIE EK A
Sbjct: 79 LPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEKQA 129
Score = 72.1 bits (169), Expect = 7e-13
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +3
Query: 186 PSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNPXPDKDAIEAEKEKNKFLNGIENF 365
P+ +D+ K ++L +E F+ +LK+ TQEK P + + AEK + GI F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 366 DPTKLKHTETCEKNPLPTKDVIEQEK 443
+ LKHTET EKNPLP K+ IEQEK
Sbjct: 64 NQNNLKHTETNEKNPLPDKEAIEQEK 89
>AE014298-598|AAF45920.1| 129|Drosophila melanogaster CG4944-PB,
isoform B protein.
Length = 129
Score = 160 bits (388), Expect = 2e-39
Identities = 75/111 (67%), Positives = 88/111 (79%)
Frame = +3
Query: 117 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNP 296
KSQLEGFN L++ T EKI+LP+AEDV KTQ+S+F+GI F+ + LKHTET EKNP
Sbjct: 19 KSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQNNLKHTETNEKNP 78
Query: 297 XPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 449
PDK+AIE EKEKN+F+ GIENFD KLKHTET EKN LPTK+VIE EK A
Sbjct: 79 LPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEKQA 129
Score = 72.1 bits (169), Expect = 7e-13
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +3
Query: 186 PSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNPXPDKDAIEAEKEKNKFLNGIENF 365
P+ +D+ K ++L +E F+ +LK+ TQEK P + + AEK + GI F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 366 DPTKLKHTETCEKNPLPTKDVIEQEK 443
+ LKHTET EKNPLP K+ IEQEK
Sbjct: 64 NQNNLKHTETNEKNPLPDKEAIEQEK 89
>AE014298-597|AAF45919.1| 129|Drosophila melanogaster CG4944-PA,
isoform A protein.
Length = 129
Score = 160 bits (388), Expect = 2e-39
Identities = 75/111 (67%), Positives = 88/111 (79%)
Frame = +3
Query: 117 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNP 296
KSQLEGFN L++ T EKI+LP+AEDV KTQ+S+F+GI F+ + LKHTET EKNP
Sbjct: 19 KSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQNNLKHTETNEKNP 78
Query: 297 XPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKSA 449
PDK+AIE EKEKN+F+ GIENFD KLKHTET EKN LPTK+VIE EK A
Sbjct: 79 LPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPTKEVIEAEKQA 129
Score = 72.1 bits (169), Expect = 7e-13
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = +3
Query: 186 PSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNPXPDKDAIEAEKEKNKFLNGIENF 365
P+ +D+ K ++L +E F+ +LK+ TQEK P + + AEK + GI F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 366 DPTKLKHTETCEKNPLPTKDVIEQEK 443
+ LKHTET EKNPLP K+ IEQEK
Sbjct: 64 NQNNLKHTETNEKNPLPDKEAIEQEK 89
>AE014298-599|AAN09116.1| 97|Drosophila melanogaster CG4944-PC,
isoform C protein.
Length = 97
Score = 91.1 bits (216), Expect = 1e-18
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = +3
Query: 117 KSQLEGFNTSCLRDVDTNEKIVLPSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNP 296
KSQLEGFN L++ T EKI+LP+AEDV KTQ+S+F+GI F+ + LKHTET EKNP
Sbjct: 19 KSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAFNQNNLKHTETNEKNP 78
Query: 297 XPDKDAIEAEKEKNK 341
PDK+ E E+ ++
Sbjct: 79 LPDKEG-EGEESVHR 92
Score = 62.5 bits (145), Expect = 5e-10
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +3
Query: 186 PSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEKNPXPDKDAIEAEKEKNKFLNGIENF 365
P+ +D+ K ++L +E F+ +LK+ TQEK P + + AEK + GI F
Sbjct: 6 PALKDLP--KVAENLKSQLEGFNQDKLKNASTQEKIILPTAEDVAAEKTQQSIFEGITAF 63
Query: 366 DPTKLKHTETCEKNPLPTKD 425
+ LKHTET EKNPLP K+
Sbjct: 64 NQNNLKHTETNEKNPLPDKE 83
>AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein.
Length = 1530
Score = 30.7 bits (66), Expect = 2.0
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 183 LPSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEK--NPXPDKDAIEAEKEKNKFLNGI 356
+P AE T K G+ D S+LK T +EK PD+ AI E + + +N
Sbjct: 258 VPFAEANNNSGTSKKTNFGLANLDLSKLKPTVKEEKVLQAKPDQMAIIQELQTD--MNSS 315
Query: 357 ENFDPTKLKHT 389
N P L HT
Sbjct: 316 MNQKPDHLNHT 326
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 272 HRDSGEEPXSGQRRYRSGEGKEQIPERHRELRSH*AEAHGDVRKEPAPHK 421
H + GE+P SG+R +RS E +Q ER + S + + + P P K
Sbjct: 1505 HNEGGEQPGSGEREHRSRE--KQSRERDEIVPSPLPKKRDENDQSPVPKK 1552
>AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA
protein.
Length = 1579
Score = 30.7 bits (66), Expect = 2.0
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 183 LPSAEDVXTXKTQKSLFDGIEKFDSSQLKHTETQEK--NPXPDKDAIEAEKEKNKFLNGI 356
+P AE T K G+ D S+LK T +EK PD+ AI E + + +N
Sbjct: 307 VPFAEANNNSGTSKKTNFGLANLDLSKLKPTVKEEKVLQAKPDQMAIIQELQTD--MNSS 364
Query: 357 ENFDPTKLKHT 389
N P L HT
Sbjct: 365 MNQKPDHLNHT 375
>AE014134-2150|AAF53159.2| 270|Drosophila melanogaster CG14947-PA
protein.
Length = 270
Score = 29.9 bits (64), Expect = 3.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 276 ETQEKNPXPDKDAIEAEKEKNKFLNGIENFDP-TKLKHTETCEKNPLPTKDVIEQ 437
ET E + P ++ +N+ + +E FD T+L +T T ++P P ++EQ
Sbjct: 127 ETDENSSTPQSSCLQLWSTRNQ--DAMEIFDSSTRLTNTNTPGRSPQPASVIVEQ 179
>AY058405-1|AAL13634.1| 633|Drosophila melanogaster GH17657p
protein.
Length = 633
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 276 ETQEKNPXPDKDAIEAEKEKNKFLNGIENFDPTKL 380
E ++K KD E E +KNK L + N+D T++
Sbjct: 13 EKKKKKDDEKKDNAEEELQKNKELKCVSNYDKTEI 47
>AE013599-2281|AAF57997.1| 633|Drosophila melanogaster CG7848-PA
protein.
Length = 633
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 276 ETQEKNPXPDKDAIEAEKEKNKFLNGIENFDPTKL 380
E ++K KD E E +KNK L + N+D T++
Sbjct: 13 EKKKKKDDEKKDNAEEELQKNKELKCVSNYDKTEI 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,038,438
Number of Sequences: 53049
Number of extensions: 512168
Number of successful extensions: 1630
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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