Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2465
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical pr... 30 1.4
L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 7.4
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 7.4
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 28 7.4
AF016427-2|AAB65352.1| 54|Caenorhabditis elegans Hypothetical ... 27 9.8
>L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical
protein ZC262.5 protein.
Length = 54
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 57 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 170
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical
protein R05D3.6 protein.
Length = 54
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 57 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 170
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical
protein Y57G11B.5 protein.
Length = 225
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/90 (23%), Positives = 37/90 (41%)
Frame = +3
Query: 27 MWKTVLITIFAAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLN 206
M+K+++ + A +A S +T + AED P A R F C K + + +
Sbjct: 1 MFKSLVFSALLAYAVAAPMSSMTTAIDRIDQIFQAEDSTPACNAETRRFNACFKDINEKS 60
Query: 207 VLKTEIEEAKPNGALDEVFKKYCDKSAQLK 296
L+ ++ + EV + D LK
Sbjct: 61 RLEM-FQDVTKFPSKSEVLESVADIRKALK 89
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein
ZC101.2b protein.
Length = 1160
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 911 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 945
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -2
Query: 687 GQGKVFGHELESVIPPXFAGVGCGTLXEGFHDTGG 583
GQG + + PP + G C G+ TGG
Sbjct: 910 GQGLTAAEVEQCICPPGYVGTSCEDCAPGYSRTGG 944
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 242
PE E +RT G+ G++D+N + + A+PN
Sbjct: 64 PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96
>AF016427-2|AAB65352.1| 54|Caenorhabditis elegans Hypothetical
protein F32D1.2 protein.
Length = 54
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 57 AAGVLADDFSQITAVVTSQCTK---NNAEDKVPEVEAALRTFGN 179
AAG+ +SQI A +T +CTK A K PE + T+ N
Sbjct: 6 AAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWEN 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,737,776
Number of Sequences: 27780
Number of extensions: 292246
Number of successful extensions: 741
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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