Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2458
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 121 1e-28
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 120 2e-28
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 30 0.25
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 27 2.3
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 3.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.1
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 26 5.4
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 7.2
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 25 7.2
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 25 9.5
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 121 bits (291), Expect = 1e-28
Identities = 51/93 (54%), Positives = 72/93 (77%)
Frame = +3
Query: 213 HAKXHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRED 392
HAK H+V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D
Sbjct: 55 HAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDD 113
Query: 393 LKIPDGDLGTQLRTDFXSGKELLCTVLKSCGXE 491
+++P+G+LG ++ F GK+L+ TV+ + G E
Sbjct: 114 VRLPEGELGNEIEEGFEEGKDLIITVVSAMGEE 146
Score = 81.0 bits (191), Expect = 1e-16
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = +2
Query: 89 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHG 211
+GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHG
Sbjct: 14 AGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHG 54
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 120 bits (288), Expect = 2e-28
Identities = 50/93 (53%), Positives = 72/93 (77%)
Frame = +3
Query: 213 HAKXHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRED 392
HAK H+V +DIFNG+KYED+ PSTHNMDVP VKR++YQL +I DDGYL LM +G ++D
Sbjct: 55 HAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDD 113
Query: 393 LKIPDGDLGTQLRTDFXSGKELLCTVLKSCGXE 491
+++P+G+LG ++ F G++L+ TV+ + G E
Sbjct: 114 VRLPEGELGNEIEEGFDEGRDLIITVVSAMGEE 146
Score = 81.0 bits (191), Expect = 1e-16
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = +2
Query: 89 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHG 211
+GAS TFPMQCSALRKNG V++KGRPCKIV+MSTSKTGKHG
Sbjct: 14 AGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHG 54
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 30.3 bits (65), Expect = 0.25
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 104 WLRPRSMPVSKCVFFDVTHCCVL 36
W++ R P+ +CVFF + HC VL
Sbjct: 193 WVKHRDFPIVQCVFFTL-HCAVL 214
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 27.1 bits (57), Expect = 2.3
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +3
Query: 168 ARLLKCPHPKPESTXHAKXHLVGIDIFNGKKYEDICPSTHNMDV---PHVKREDYQLTDI 338
A +K P P+ H K V + G PS H + +KREDY+LT
Sbjct: 43 AASVKTPSTPPKECSHLKKG-VKLSHLKGNARALRDPSKHLCFICTTEKIKREDYELTLC 101
Query: 339 SDDGYL 356
++ GYL
Sbjct: 102 ANCGYL 107
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 288 NMDVPHVKREDYQLTDISDDGYL 356
NM +P+++ E Q+ D + D YL
Sbjct: 968 NMSIPYIRGEYVQMIDANQDNYL 990
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSSRRSP 374
++ +V S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 1178 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPIT 1237
Query: 373 LSAI 362
S+I
Sbjct: 1238 SSSI 1241
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N S P+ S V + P + S +L SS
Sbjct: 1346 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 1401
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N+S P+ S + + P + S +L SS
Sbjct: 1358 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S V P + S +L SS
Sbjct: 1406 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSS 1461
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 1718 SSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N S P+ S V + P + S +L SS
Sbjct: 2186 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2241
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N+S P+ S + + P + S +L SS
Sbjct: 2198 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 1490 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 1658 SSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1713
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + + S+P STV N+S P+ S + +P + S +L SS
Sbjct: 1238 SSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + + P + S +L SS
Sbjct: 2486 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2541
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + + P + S +L SS
Sbjct: 2786 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 470 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 878 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 933
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 1034 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1089
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N S P+ S V P + S ++ SS
Sbjct: 1154 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1209
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ +V S + + T S+P STV N S P+ S V P + S ++ SS
Sbjct: 1466 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1521
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 1814 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 2006 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 2582 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 2678 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2733
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 2906 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2961
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSSRRSP 374
++ ++ S + + + S+P STV N+S P+ S + P + S +L SS
Sbjct: 3122 SSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAIT 3181
Query: 373 LSAI 362
S+I
Sbjct: 3182 SSSI 3185
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S + + T S+P STV N+S P+ S + P + S +L SS
Sbjct: 3266 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSS 3321
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 547 NAELVYXSRXVFAXTXXTHSSPQDFSTVHNNSLPLXKS--VRNCVPRSPSGILRSS 386
++ ++ S V + + S+P STV N+S P+ S + P + S +L SS
Sbjct: 3350 SSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 3405
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 25.8 bits (54), Expect = 5.4
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -1
Query: 203 FRFWMWTFQQSCMDD--PSA*RNRFYAGPNIAWGRWLRPRSMPVSKCVFFDVTHCCVLNL 30
FRF+++ F S + + PS F A AW W+RP S V++ +F + T +L +
Sbjct: 262 FRFFLYVFIASFIWNWFPSY---IFQALSLFAWVTWIRPNSPTVNQ-IFGESTGISILPM 317
Query: 29 T 27
T
Sbjct: 318 T 318
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 423 QLRTDFXSGKELLCTVLKSCG 485
QL+ F E LCT+L SCG
Sbjct: 522 QLQNGFIPTCERLCTILLSCG 542
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 201 ESTXHAKXHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDY 323
E A L+ D F+G ++ IC S N+ + V ED+
Sbjct: 877 EKEADAYAPLLAYDKFDGDEFACICESMKNVKLDFVTLEDW 917
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 258 KYEDICPSTHNMDVPHVKRED 320
K +D CPST D+ H+ R D
Sbjct: 186 KLQDRCPSTSLKDIDHLFRVD 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,516,328
Number of Sequences: 5004
Number of extensions: 50169
Number of successful extensions: 191
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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