Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2445
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 27 2.2
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 27 2.9
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 27 3.8
SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyc... 26 5.0
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 26 5.0
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera... 26 6.6
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 25 8.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 8.7
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 25 8.7
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 8.7
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 8.7
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 8.7
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 346 EAEGS*REET*LGS**DGRHCSEDGQDRGGVPHPQRADE*LH 471
EAE R + LG G+HCSE G P P+ LH
Sbjct: 320 EAEAKARRDKRLGELLTGKHCSECGTPLYSDPSPEELGIWLH 361
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 111 AVHPFYQQLIGGRRRRNRSVNQ 176
A HP YQ L+GG +N S+ Q
Sbjct: 235 AKHPIYQSLLGGGDIQNESLQQ 256
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 214 GGDEFDLLRLLSSWFTD--RFLRRRPPMSCW 128
G DE + L SWF D +F+ R P + W
Sbjct: 679 GNDELTSKKFLKSWFADPSKFVDRTPENAPW 709
>SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 279 TGSASITSYARPPFDISWQRISVVMNLTFFGCL 181
TG S Y P ++WQ+ +V +++ GC+
Sbjct: 171 TGYVSTRYYRAPEIMLTWQKYNVEVDIWSAGCI 203
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 521 CYLSIPWSGATLIDL*DGIIRGSVSCK*RYYNSIFF 628
C L+ P+ G + ++L I +G++SC +Y+ F
Sbjct: 220 CMLTHPFEGRSYLELQRNICQGNLSCWDHHYSDDVF 255
>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
formyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 242 GGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAE 364
G + + VI A G P+ + T S+E ++EK+ AAE
Sbjct: 151 GAMVHWVIAAVDEGKPIIVQEVPILSTDSIEALEEKIHAAE 191
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 7 GIAT*LRHTLDSPFDHHHADRTRK 78
G+ T LR D P DH A +TR+
Sbjct: 586 GLRTKLRRNFDLPSDHVKAKKTRR 609
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/56 (23%), Positives = 24/56 (42%)
Frame = +2
Query: 212 TEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRRS 379
T+ ++ GG A +A P +P P +P P+ E +++ R +S
Sbjct: 872 TKSTVNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPATRPKS 927
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 143 RSAPKKPVGKPRTKQPKKVKFITTEIRCQEMSK 241
+ +PK+P KP T++P+ + ++ R E+SK
Sbjct: 481 KGSPKEPKAKPSTERPETHRTLSYS-RLSELSK 512
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 125 LPAAHRRSAPKKPVGKPRTKQPKKVKFITTEIRCQEMSKGGLAYEVILAEPVGVPVPRRA 304
+P + APK+ VG P P+ ++ T + + G + +E + P P A
Sbjct: 819 VPFFRQPDAPKRFVGTPDYLAPETLRGSTQDDMVDWWALGCVLFEFLFGYP-----PFHA 873
Query: 305 DSPEK 319
++PEK
Sbjct: 874 ETPEK 878
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 311 PEKTPSVEEIQEKLKAAEERRRSLE 385
PE TP+VE++ E L E R SL+
Sbjct: 301 PESTPAVEKVSENL--GSETRESLQ 323
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 296 RRADSPEKTPSVEEIQEKLK 355
RRAD PE+TPS ++ L+
Sbjct: 21 RRADRPEETPSSSVYEQNLR 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,676,012
Number of Sequences: 5004
Number of extensions: 50532
Number of successful extensions: 131
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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