Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2441
(740 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 101 1e-22
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 79 7e-16
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 78 2e-15
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 49 6e-07
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 48 1e-06
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 40 4e-04
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 40 5e-04
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 39 7e-04
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 32 0.099
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.53
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 25 8.6
SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyce... 25 8.6
SPAC630.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 8.6
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 101 bits (242), Expect = 1e-22
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Frame = +1
Query: 118 SSDVIELTPSN-FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGA 288
+S V+EL N + + S + +IEF+A WCGHCKSL P Y++ + V +G
Sbjct: 19 ASGVVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGK 78
Query: 289 LDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFVEAALNAAKEKAYENLXXX 468
+DAD H V+ KY +TGFPT+ F P Q + V++ EK
Sbjct: 79 IDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARD--VDSLTQFVSEKT-----GI 131
Query: 469 XXXXXXXXXXVITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEP 609
V+ L NF ++V+D LVEFYA WCG+CK L P
Sbjct: 132 KKRKIVLPSNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAP 178
Score = 75.8 bits (178), Expect = 6e-15
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Frame = +1
Query: 121 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALD 294
S+V+EL NFDK+V + + ++EF+A WCG+CK L P Y+ + K V++ ++
Sbjct: 140 SNVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKIN 199
Query: 295 ADEHRSVSQKYGVTGFPTIKIF-TGSKHTP--YQGQRTAEGFVE 417
AD + + + V FPTIK F K P Y+G R+ E +E
Sbjct: 200 ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIE 243
Score = 30.7 bits (66), Expect = 0.23
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 662 LDATVHTTMASRYQVQGYPTIKLFP 736
+DA H+ +A +Y + G+PT+ FP
Sbjct: 79 IDADTHSDVADKYHITGFPTLIWFP 103
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 656 VPLDATVHTTMASRYQVQGYPTIKLFP 736
V ++A V + ++V +PTIK FP
Sbjct: 196 VKINADVFADIGRLHEVASFPTIKFFP 222
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 79.0 bits (186), Expect = 7e-16
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 8/101 (7%)
Frame = +1
Query: 121 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL--D 294
S+ IEL NF K V ++ F+APWCG+CK LVP Y+K A L ++ V A+ D
Sbjct: 31 SNTIELNSKNFRKFVKAKGPSLVV-FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCD 89
Query: 295 ADEHRSVSQKYGVTGFPTIK-IFTGSK-----HTPYQGQRT 399
AD++R+V +Y V GFPTIK ++ SK T Y G R+
Sbjct: 90 ADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRS 130
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 502 ITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKLGAPGCNSSH 681
I L NF++ V LV FYAPWCG+CK L P + K A+ L + + A C++
Sbjct: 34 IELNSKNFRKFVKAKGPS-LVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQ 92
Query: 682 NNGV 693
N V
Sbjct: 93 NRAV 96
Score = 33.5 bits (73), Expect = 0.032
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 656 VPLDATVHTTMASRYQVQGYPTIKL-FPS 739
V DA + + S+YQVQG+PTIKL +PS
Sbjct: 86 VDCDADQNRAVCSQYQVQGFPTIKLVYPS 114
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 77.8 bits (183), Expect = 2e-15
Identities = 34/103 (33%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +1
Query: 115 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL-KGIVKVGAL 291
+S++V ++ ++L+T +D++ +++F+APWCGHCK+L PEY+ AA L K + + +
Sbjct: 20 ASAEVPKVNKEGLNELIT-ADKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEV 78
Query: 292 DADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFVE 417
D E + +Y + G+PT+ +F G + + Y G R + V+
Sbjct: 79 DCTEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVK 121
Score = 74.9 bits (176), Expect = 1e-14
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Frame = +1
Query: 112 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVG 285
+S D++ L NFD +V + + ++EF+APWCGHCK+L P Y+K A V V
Sbjct: 352 ESQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVA 411
Query: 286 ALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTP--YQGQRTAE 405
+DA E+ +S ++GFPTI F K P Y+G RT E
Sbjct: 412 KIDATEN-DIS--VSISGFPTIMFFKANDKVNPVRYEGDRTLE 451
Score = 58.8 bits (136), Expect = 8e-10
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +1
Query: 499 VITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATE 633
++ L NF ++V+D LVEFYAPWCGHCKNL P + K A E
Sbjct: 357 LVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEE 401
Score = 49.2 bits (112), Expect = 6e-07
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 535 VLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELK 639
++ +D + +V+FYAPWCGHCK L P + AA EL+
Sbjct: 35 LITADKVLMVKFYAPWCGHCKALAPEYESAADELE 69
Score = 30.7 bits (66), Expect = 0.23
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 638 KERSSWVPLDATVHTTMASRYQVQGYPTIKLF 733
K+ S V +D T + S Y ++GYPT+ +F
Sbjct: 70 KDGISLVEVDCTEEGDLCSEYSIRGYPTLNVF 101
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 49.2 bits (112), Expect = 6e-07
Identities = 21/64 (32%), Positives = 40/64 (62%)
Frame = +1
Query: 169 NSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPT 348
++D++ +++F+A WCG CK L P +K + + + A++AD+ ++QK GV PT
Sbjct: 33 SADKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFI-AVNADKFSDIAQKNGVYALPT 91
Query: 349 IKIF 360
+ +F
Sbjct: 92 MVLF 95
Score = 36.3 bits (80), Expect = 0.005
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 538 LDSDDLWLVEFYAPWCGHCKNLEPHWAKAATE 633
+ +D + +V+FYA WCG CK L+P K + +
Sbjct: 32 ISADKVTVVDFYADWCGPCKYLKPFLEKLSEQ 63
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 48.0 bits (109), Expect = 1e-06
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 127 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEH 306
V +++ S+ K + D++ +++FFA WCG CK++ P++++ + + +D D+
Sbjct: 2 VKQVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFI-KVDVDQL 60
Query: 307 RSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFVEAALNA 432
++ + GV P+ ++ G K G A+ +EA++ A
Sbjct: 61 SEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAK--LEASIKA 101
Score = 35.5 bits (78), Expect = 0.008
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 517 SNFKELVLDSDDLWLVEFYAPWCGHCKNLEP 609
S FK +V D L +V+F+A WCG CK + P
Sbjct: 9 SEFKSIVCQ-DKLVVVDFFATWCGPCKAIAP 38
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 39.9 bits (89), Expect = 4e-04
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 190 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGA-LDADEHRSVSQKYGVTGFPTIKIFTG 366
++ +A WCG CK++ P + + A V A ++ DE R ++ GV PT F
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFEN 83
Query: 367 SK 372
K
Sbjct: 84 GK 85
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 562 VEFYAPWCGHCKNLEPHWAKAATE 633
V+ YA WCG CK + P +++ A++
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASK 47
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 130 IELT-PSNFDKLVTNSDE-IWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 303
+E+T F +++ N E I ++ F+APW CK + + + A+ K V + ++A++
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL-KIEAEK 61
Query: 304 HRSVSQKYGVTGFPTIKIFTGSK 372
+++ + V P + G+K
Sbjct: 62 FSDIAESFDVNAVPLFVLIHGAK 84
Score = 30.3 bits (65), Expect = 0.30
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 523 FKELVLDS-DDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKL 654
F+E++ + + + L+ FYAPW CK + + + A + K V L
Sbjct: 11 FQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFL 55
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 39.1 bits (87), Expect = 7e-04
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 502 ITLTDSNFKELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVK 651
+ LTD++ + V S W +++Y P CG CK L P W + K +V+
Sbjct: 29 VPLTDNDLESEV--SKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVE 76
Score = 38.3 bits (85), Expect = 0.001
Identities = 22/97 (22%), Positives = 40/97 (41%)
Frame = +1
Query: 145 SNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQK 324
++ D +T+ E W I+F++ C C + + A ++G + V ++ + ++
Sbjct: 289 ADIDAALTDK-EGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACKQ 347
Query: 325 YGVTGFPTIKIFTGSKHTPYQGQRTAEGFVEAALNAA 435
Y + FPT F Y G V A AA
Sbjct: 348 YSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEEAA 384
Score = 33.5 bits (73), Expect = 0.032
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 529 ELVLDSDDLWLVEFYAPWCGHCKNLEPHWAKAATELKGKVKLGAPGC 669
+ L + W ++FY+ C C ++ W A ++GK+ + C
Sbjct: 292 DAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINC 338
Score = 32.3 bits (70), Expect = 0.075
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Frame = +1
Query: 130 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL---DAD 300
+ LT ++ + V+ W I+++ P CG CK L P + K V+ + D
Sbjct: 29 VPLTDNDLESEVSKGT--WFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVD 86
Query: 301 EHRSVSQKYGVTGFPTIKIFTGS---KHTPYQGQRTAEG----FVEAALN 429
+ +S + PT+ ++ + P+ G T+E FVE LN
Sbjct: 87 CSKELSSCANIRAVPTLYLYQNGEIVEEVPF-GASTSEASLLDFVETHLN 135
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 31.9 bits (69), Expect = 0.099
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 91 TGSLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFF 201
TGS + SDV+ L+ S L+ SD WII FF
Sbjct: 428 TGSPLAHVLCSDVVNLSVSTVFNLLCGSDTTWIINFF 464
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 29.5 bits (63), Expect = 0.53
Identities = 13/60 (21%), Positives = 24/60 (40%)
Frame = +1
Query: 211 CGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQG 390
C C + R +K+ ++ DE + + + + FPT ++F G Y G
Sbjct: 209 CEDCFHWEAVWSSITRNTDERLKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNG 268
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = -1
Query: 308 LCSSASKAPTFTMPFRALAAFLYSGTRLLQCPHHGAKNSMIQISSEFVTNLSKL 147
LC K T + + F +CPH G KN+ +Q + SK+
Sbjct: 37 LCMECGKNGTTKLLLTVIPYFREVVLMSFECPHCGFKNAQVQHAETIQPEGSKI 90
>SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 138
Score = 25.4 bits (53), Expect = 8.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 217 HCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGV-TGFPTIKIFTG 366
HC KAAR L I++ ++ E S+SQK + PT+ I G
Sbjct: 69 HCTYSQVRGPKAARVLSEILRNRITESKEKLSLSQKEKLFQNLPTVYILHG 119
>SPAC630.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 599 ILNLTGLKLPPNLKERSSWVPLDATVHTTMASRY 700
+L+ TGL +PPN KE+ W+ L SRY
Sbjct: 175 LLHCTGLLMPPN-KEQPPWLFLVLPSPCITNSRY 207
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,155,180
Number of Sequences: 5004
Number of extensions: 65429
Number of successful extensions: 234
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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