Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2437
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 223 5e-59
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 220 6e-58
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 196 9e-51
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 195 2e-50
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 195 2e-50
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 180 6e-46
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 180 6e-46
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 179 1e-45
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 107 7e-24
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 105 2e-23
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 104 4e-23
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 104 4e-23
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 77 6e-15
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 77 8e-15
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 28 3.9
U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 8.9
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 8.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 223 bits (546), Expect = 5e-59
Identities = 109/152 (71%), Positives = 122/152 (80%), Gaps = 1/152 (0%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 246 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDXXFXLXEX 422
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+ F E
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 423 XSMALTKMKEXARXLXWQXVXNAXYXPLPAYF 518
SM L KMKE A V +A +PAYF
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDA-VVTVPAYF 151
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 220 bits (537), Expect = 6e-58
Identities = 107/152 (70%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 246 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDXXFXLXEX 422
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+ F E
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 423 XSMALTKMKEXARXLXWQXVXNAXYXPLPAYF 518
SM L KMK+ A V +A +P YF
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDA-VVTVPTYF 151
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 196 bits (478), Expect = 9e-51
Identities = 91/151 (60%), Positives = 113/151 (74%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXX 425
NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE F E
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120
Query: 426 SMALTKMKEXARXLXWQXVXNAXYXPLPAYF 518
+M L KMKE A + V +A +PAYF
Sbjct: 121 AMVLQKMKETAEAVLGHSVRDA-VITVPAYF 150
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 195 bits (475), Expect = 2e-50
Identities = 92/151 (60%), Positives = 112/151 (74%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXX 425
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE F E
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 426 SMALTKMKEXARXLXWQXVXNAXYXPLPAYF 518
+M L KMKE A V +A +PAYF
Sbjct: 121 AMVLQKMKETAETYLGHTVKDA-VITVPAYF 150
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 195 bits (475), Expect = 2e-50
Identities = 92/151 (60%), Positives = 112/151 (74%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXX 425
NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE F E
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120
Query: 426 SMALTKMKEXARXLXWQXVXNAXYXPLPAYF 518
+M L KMKE A V +A +PAYF
Sbjct: 121 AMVLQKMKETAETYLGHTVKDA-VITVPAYF 150
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 180 bits (438), Expect = 6e-46
Identities = 87/147 (59%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 257
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 258 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXXSMAL 437
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++ F E +M L
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 438 TKMKEXARXLXWQXVXNAXYXPLPAYF 518
KMKE A + V NA +PAYF
Sbjct: 156 VKMKEIAESYLGKEVKNA-VVTVPAYF 181
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 180 bits (438), Expect = 6e-46
Identities = 87/147 (59%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE--RLIGDAAKNQVAMNPN 257
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ + RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 258 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXXSMAL 437
NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++ F E +M L
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
Query: 438 TKMKEXARXLXWQXVXNAXYXPLPAYF 518
KMKE A + V NA +PAYF
Sbjct: 156 VKMKEIAESYLGKEVKNA-VVTVPAYF 181
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 179 bits (435), Expect = 1e-45
Identities = 88/147 (59%), Positives = 105/147 (71%), Gaps = 2/147 (1%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 257
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 258 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXXSMAL 437
NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E F E +M L
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
Query: 438 TKMKEXARXLXWQXVXNAXYXPLPAYF 518
TKMK+ A V NA +PAYF
Sbjct: 153 TKMKQIAESYLGHEVKNA-VVTVPAYF 178
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 107 bits (256), Expect = 7e-24
Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 248
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 249 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDXXFXLXEXX 425
N NT+F KRLIGR++ED VQ D+K P+++V + G ++ K + +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEAQGK----VYSPSQVG 145
Query: 426 SMALTKMKEXARXLXWQXVXNAXYXPLPAYF 518
+ L KMKE A V NA +PAYF
Sbjct: 146 AFVLMKMKETAESYLGTTVNNA-VVTVPAYF 175
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 105 bits (253), Expect = 2e-23
Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 248
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 249 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXXS 428
N NT+F KRLIGR++ED VQ D+K P+++V V +G++ + + +
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVK-ASNGDAWVEAQGKE--YPPSQVGA 146
Query: 429 MALTKMKEXARXLXWQXVXNAXYXPLPAYF 518
L KMKE A V N +PAYF
Sbjct: 147 FVLMKMKETAESYLGTTVNN-PVVTVPAYF 175
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 104 bits (250), Expect = 4e-23
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 257
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 258 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDXXFXLXEXXSMA 434
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F S+
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 435 LTKMKEXARXLXWQXVXNAXYXPLPAYF 518
L +K A V +A +PAYF
Sbjct: 121 LRCLKYNAERKLGLEVKSA-VITVPAYF 147
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 104 bits (250), Expect = 4e-23
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 257
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60
Query: 258 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDXXFXLXEXXSMA 434
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F S+
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 435 LTKMKEXARXLXWQXVXNAXYXPLPAYF 518
L +K A V +A +PAYF
Sbjct: 121 LRCLKYNAERKLGLEVKSA-VITVPAYF 147
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 77.4 bits (182), Expect = 6e-15
Identities = 51/142 (35%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Frame = +3
Query: 57 KYKMAKAPA--VGIDLGTTYSCVGVFQH--GKVEIIANDQGNRTTPSYVAFTDTER-LIG 221
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 222 DAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKG 392
A Q NP TI+DAKR IGR FE + +D K +PF++ D GK ++
Sbjct: 85 TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDS 144
Query: 393 EDXXFXLXEXXSMALTKMKEXA 458
E S+ + +K A
Sbjct: 145 GTKNVYPEEIGSLIIGYLKSAA 166
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 77.0 bits (181), Expect = 8e-15
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 263
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 264 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDXXFXLXEXXSMALT 440
+ + K LIGRKF D Q + P +VV ++V+Y GE F + + LT
Sbjct: 64 VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123
Query: 441 KMK 449
K++
Sbjct: 124 KLR 126
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 1/147 (0%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 257
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 258 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDXXFXLXEXXSMAL 437
L+G+ + + + + F V D K + +K + + +M L
Sbjct: 86 LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMIL 145
Query: 438 TKMKEXARXLXWQXVXNAXYXPLPAYF 518
K+ +P YF
Sbjct: 146 ANAKKFTEEYAQAAEIKDVVITVPVYF 172
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 173 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 268
D V+CCVH R S+ + Q+ D+ Q N+
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 17 SRVFLRTSNKX*LKIQNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCV 196
S++ T ++ LK NGK T+SRN+ V RE D Q+P Q D +L V
Sbjct: 164 SKISKLTESEKKLKETNGKVTKSRNQLSERVSELEAQLKRE-ADTAQKPKQADPDLLNKV 222
Query: 197 HR 202
R
Sbjct: 223 GR 224
>U41007-6|AAA82269.2| 348|Caenorhabditis elegans Hypothetical
protein C33H5.10 protein.
Length = 348
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Frame = +2
Query: 53 LKIQNGKST--RSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRC 226
L IQ S R R +S H L P GG + G + S H H +
Sbjct: 241 LYIQKASSMDRRERTKSKQHPLSIMDAPKDRGGRTEEMVGVKQESFRQQQHTFDRQHSQN 300
Query: 227 RQEPGGDEPQQHNIRCQTSH 286
RQ+ D P+ H + H
Sbjct: 301 RQKSTFDRPKTHEEQVLEQH 320
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 172 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 68
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 374 DLRFASITDNLERPVLHVGLHSSIFELTSDETFGIEY 264
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,238,827
Number of Sequences: 27780
Number of extensions: 227347
Number of successful extensions: 661
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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