Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2436
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023952-1|ABB36456.1|  707|Drosophila melanogaster GH06117p pro...    31   1.6  
AE014296-1244|AAN12060.1|  691|Drosophila melanogaster CG8588-PD...    31   1.6  
AE014296-1243|AAN12059.1|  677|Drosophila melanogaster CG8588-PC...    31   1.6  
AE014296-1242|AAN12058.1|  666|Drosophila melanogaster CG8588-PB...    31   1.6  
AE014296-1241|AAF50572.1|  652|Drosophila melanogaster CG8588-PA...    31   1.6  
AF106677-1|AAD05225.1|  693|Drosophila melanogaster dissatisfact...    28   8.4  
AE014134-989|AAF52303.1|  691|Drosophila melanogaster CG9019-PA ...    28   8.4  

>BT023952-1|ABB36456.1|  707|Drosophila melanogaster GH06117p
           protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 137 GYAVRRYATRLFTNTTQAQRVNGVERELHGGW 232
           GYA  R  ++LF  +   Q +N  +RE  G W
Sbjct: 280 GYAASRSGSKLFDRSQHEQSINVTDREARGHW 311


>AE014296-1244|AAN12060.1|  691|Drosophila melanogaster CG8588-PD,
           isoform D protein.
          Length = 691

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 137 GYAVRRYATRLFTNTTQAQRVNGVERELHGGW 232
           GYA  R  ++LF  +   Q +N  +RE  G W
Sbjct: 280 GYAASRSGSKLFDRSQHEQSINVTDREARGHW 311


>AE014296-1243|AAN12059.1|  677|Drosophila melanogaster CG8588-PC,
           isoform C protein.
          Length = 677

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 137 GYAVRRYATRLFTNTTQAQRVNGVERELHGGW 232
           GYA  R  ++LF  +   Q +N  +RE  G W
Sbjct: 280 GYAASRSGSKLFDRSQHEQSINVTDREARGHW 311


>AE014296-1242|AAN12058.1|  666|Drosophila melanogaster CG8588-PB,
           isoform B protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 137 GYAVRRYATRLFTNTTQAQRVNGVERELHGGW 232
           GYA  R  ++LF  +   Q +N  +RE  G W
Sbjct: 255 GYAASRSGSKLFDRSQHEQSINVTDREARGHW 286


>AE014296-1241|AAF50572.1|  652|Drosophila melanogaster CG8588-PA,
           isoform A protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 137 GYAVRRYATRLFTNTTQAQRVNGVERELHGGW 232
           GYA  R  ++LF  +   Q +N  +RE  G W
Sbjct: 255 GYAASRSGSKLFDRSQHEQSINVTDREARGHW 286


>AF106677-1|AAD05225.1|  693|Drosophila melanogaster dissatisfaction
           protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = -2

Query: 233 STHHVARVQHHSHVALV*CL*ISAWRNVALHSHHE-KSVHLSFARSSLFIYLLRTNTH 63
           + HH     HH+H A      ++A     LH HH    V L    S+ F Y    +TH
Sbjct: 121 AAHHHHHHHHHAHAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTH 178


>AE014134-989|AAF52303.1|  691|Drosophila melanogaster CG9019-PA
           protein.
          Length = 691

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = -2

Query: 233 STHHVARVQHHSHVALV*CL*ISAWRNVALHSHHE-KSVHLSFARSSLFIYLLRTNTH 63
           + HH     HH+H A      ++A     LH HH    V L    S+ F Y    +TH
Sbjct: 121 AAHHHHHHHHHAHAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTH 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,722,439
Number of Sequences: 53049
Number of extensions: 474309
Number of successful extensions: 1167
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)