Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2433
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    27   0.62 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.9  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   3.3  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        23   7.6  
AY752908-1|AAV30082.1|  103|Anopheles gambiae peroxidase 13B pro...    23   7.6  
AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    23   7.6  
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    23   7.6  
AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like p...    23   7.6  
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    23   7.6  
AY341214-1|AAR13778.1|  260|Anopheles gambiae SRPN9 protein.           23   7.6  
AY341213-1|AAR13777.1|  260|Anopheles gambiae SRPN9 protein.           23   7.6  
AY341212-1|AAR13776.1|  260|Anopheles gambiae SRPN9 protein.           23   7.6  
AY341211-1|AAR13775.1|  260|Anopheles gambiae SRPN9 protein.           23   7.6  
AY341210-1|AAR13774.1|  260|Anopheles gambiae SRPN9 protein.           23   7.6  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 561 NNITETLSRFWLLKKSDFNTLSTFYHLQYSTSRIXVXKPRIGKYENKF 704
           N +T   SR++L    DF+  +T Y L+  +    V +  +    N+F
Sbjct: 86  NTVTSGGSRYFLTMIDDFSRYTTVYFLKRKSEAAEVIEEYVTMVHNRF 133


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 182  RGLPVNPWQPEDQPVRDPRRP 244
            R +P  P  PE QPVR  +RP
Sbjct: 2975 RDIPNIPPAPEQQPVRHQQRP 2995


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 67  PPHSARVLSSQTKPLSRPRTLSLF 138
           PP+S R  ++   PL+ P ++ LF
Sbjct: 161 PPYSPRTTTTPEPPLADPNSMHLF 184


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 87  AVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQR 215
           AV  + A K     Q+     V QK  + IEL  YQ+ P  QR
Sbjct: 136 AVGFSSADKLFFGRQIPVSTCVQQKFADTIELLDYQTQPDEQR 178


>AY752908-1|AAV30082.1|  103|Anopheles gambiae peroxidase 13B
           protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 189 YQSIPGNQRINLYEILGDQVPSEVINNLQ 275
           Y+++   +R   +E LG ++P EVI  L+
Sbjct: 27  YRALCNLKRAQTWEDLGREIPPEVIARLR 55


>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 68  GSGDRHHDQEAEHVGLHCLLCQ 3
           GS D  HD   EH    C LC+
Sbjct: 111 GSRDDLHDPTGEHAENLCALCR 132


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 68  GSGDRHHDQEAEHVGLHCLLCQ 3
           GS D  HD   EH    C LC+
Sbjct: 111 GSRDDLHDPTGEHAENLCALCR 132


>AY341233-1|AAR13797.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 68  GSGDRHHDQEAEHVGLHCLLCQ 3
           GS D  HD   EH    C LC+
Sbjct: 111 GSRDDLHDPTGEHAENLCALCR 132


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 68  GSGDRHHDQEAEHVGLHCLLCQ 3
           GS D  HD   EH    C LC+
Sbjct: 111 GSRDDLHDPTGEHAENLCALCR 132


>AY341214-1|AAR13778.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 87  AVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQR 215
           AV  + A K     Q+     V QK  + IEL  YQ+ P  QR
Sbjct: 10  AVGFSSADKLFFGRQIPVSTCVQQKFADTIELLDYQTQPDEQR 52


>AY341213-1|AAR13777.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 87  AVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQR 215
           AV  + A K     Q+     V QK  + IEL  YQ+ P  QR
Sbjct: 10  AVGFSSADKLFFGRQIPVSTCVQQKFADTIELLDYQTQPDEQR 52


>AY341212-1|AAR13776.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 87  AVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQR 215
           AV  + A K     Q+     V QK  + IEL  YQ+ P  QR
Sbjct: 10  AVGFSSADKLFFGRQIPVSTCVQQKFADTIELLDYQTQPDEQR 52


>AY341211-1|AAR13775.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 87  AVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQR 215
           AV  + A K     Q+     V QK  + IEL  YQ+ P  QR
Sbjct: 10  AVGFSSADKLFFGRQIPVSTCVQQKFADTIELLDYQTQPDEQR 52


>AY341210-1|AAR13774.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 87  AVFSNEAIKQAQNTQLIPKDAVIQKVQEGIELAAYQSIPGNQR 215
           AV  + A K     Q+     V QK  + IEL  YQ+ P  QR
Sbjct: 10  AVGFSSADKLFFGRQIPVSTCVQQKFADTIELLDYQTQPDEQR 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,812
Number of Sequences: 2352
Number of extensions: 12971
Number of successful extensions: 70
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)