Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2422
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-2|CAB03007.1| 491|Caenorhabditis elegans Hypothetical pr... 95 6e-20
Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 33 0.22
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 33 0.22
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 33 0.22
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 33 0.22
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 33 0.22
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 32 0.38
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 32 0.38
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical pr... 31 0.66
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 31 1.2
Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical pr... 29 2.7
U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 28 8.1
>Z81070-2|CAB03007.1| 491|Caenorhabditis elegans Hypothetical
protein F26E4.3 protein.
Length = 491
Score = 94.7 bits (225), Expect = 6e-20
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +1
Query: 310 GRYCAARPDDNKCCYNRKDDCSVPILGT-LCYCDEFCDH-TRHHDDCCPDYKKVCSPPQI 483
G YC+ R + CC NR DDC+VPILG LCYCD FCD +DCCPD++ C I
Sbjct: 67 GDYCSVRT--HTCCENRDDDCTVPILGDHLCYCDMFCDRGPDGGNDCCPDFEATCRGKDI 124
Query: 484 TSVSCEYEQQTYAPDDQVNKGCNLCTCKVDNDNNAYWSCXQDTCMMSEDLVNDVNXQGTP 663
+ + D K C CTC +N +W C C++ D++ ++
Sbjct: 125 QNDQRIDGESCSMDGDTKEKNCEKCTC-----HNGFWKCDGTACLIQPDILEKIHTGRYS 179
Query: 664 WKATTYPGSTRKNXKTD*YXNLGT-FP 741
W A Y ++ LGT FP
Sbjct: 180 WSARNYSAFWGRSLSDGIKYRLGTLFP 206
>Z92809-3|CAB07269.1| 440|Caenorhabditis elegans Hypothetical
protein R17.3 protein.
Length = 440
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 397 CYCDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCTCK 567
CYCDE C DCC DY VC PP+ V +++ T D N C + T K
Sbjct: 219 CYCDEHCVTL---GDCCSDYTFVC-PPR-DCVLTDWDSWTQCTAD--NGTCGIGTQK 268
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 442 CCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKG-CNLCTCKVDNDNNAYWSCXQDTCM 618
CCP VCS +S C Y+ YA +Q G C+ C+C C Q C
Sbjct: 724 CCP----VCSDALSSSAVCSYQSSVYAIGEQWQDGRCSNCSCVTGGQT----VCRQMVCP 775
Query: 619 MSEDLV 636
+D V
Sbjct: 776 HCDDPV 781
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 442 CCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKG-CNLCTCKVDNDNNAYWSCXQDTCM 618
CCP VCS +S C Y+ YA +Q G C+ C+C C Q C
Sbjct: 658 CCP----VCSDALSSSAVCSYQSSVYAIGEQWQDGRCSNCSCVTGGQT----VCRQMVCP 709
Query: 619 MSEDLV 636
+D V
Sbjct: 710 HCDDPV 715
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 442 CCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKG-CNLCTCKVDNDNNAYWSCXQDTCM 618
CCP VCS +S C Y+ YA +Q G C+ C+C C Q C
Sbjct: 724 CCP----VCSDALSSSAVCSYQSSVYAIGEQWQDGRCSNCSCVTGGQT----VCRQMVCP 775
Query: 619 MSEDLV 636
+D V
Sbjct: 776 HCDDPV 781
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 442 CCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKG-CNLCTCKVDNDNNAYWSCXQDTCM 618
CCP VCS +S C Y+ YA +Q G C+ C+C C Q C
Sbjct: 658 CCP----VCSDALSSSAVCSYQSSVYAIGEQWQDGRCSNCSCVTGGQT----VCRQMVCP 709
Query: 619 MSEDLV 636
+D V
Sbjct: 710 HCDDPV 715
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 442 CCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKG-CNLCTCKVDNDNNAYWSCXQDTCM 618
CCP VCS +S C Y+ YA +Q G C+ C+C C Q C
Sbjct: 658 CCP----VCSDALSSSAVCSYQSSVYAIGEQWQDGRCSNCSCVTGGQT----VCRQMVCP 709
Query: 619 MSEDLV 636
+D V
Sbjct: 710 HCDDPV 715
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 442 CCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKG-CNLCTCKVDNDNNAYWSCXQDTCM 618
CCP VCS +S C Y+ YA +Q G C+ C+C C Q C
Sbjct: 658 CCP----VCSDALSSSAVCSYQSSVYAIGEQWQDGRCSNCSCVTGGQT----VCRQMVCP 709
Query: 619 MSEDLV 636
+D V
Sbjct: 710 HCDDPV 715
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Frame = +1
Query: 403 CDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQ-VNKGCNLCTCKVDND 579
C E C T+ CCPD K CE+ Q PD + V KG C ++
Sbjct: 937 CGENCLTTKF--GCCPDGKTTAKGSHNEGCGCEFAQYGCCPDGKSVAKGAGFYGCP-ESC 993
Query: 580 NNAYWSCXQDTCMMSEDLVNDVNXQGTPWKATTY 681
+ + C C + N +G P + T Y
Sbjct: 994 AQSQFGC----CPDGKTRARGENKEGCPCQYTRY 1023
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Frame = +1
Query: 403 CDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQ-VNKGCNLCTCKVDND 579
C E C T+ CCPD K CE+ Q PD + V KG C ++
Sbjct: 937 CGENCLTTKF--GCCPDGKTTAKGSHNEGCGCEFAQYGCCPDGKSVAKGAGFYGCP-ESC 993
Query: 580 NNAYWSCXQDTCMMSEDLVNDVNXQGTPWKATTY 681
+ + C C + N +G P + T Y
Sbjct: 994 AQSQFGC----CPDGKTRARGENKEGCPCQYTRY 1023
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 1/94 (1%)
Frame = +1
Query: 403 CDEFCDHTRHHDDCCPDYKKVCSPPQITSVSCEYEQQTYAPDDQ-VNKGCNLCTCKVDND 579
C E C T+ CCPD K CE+ Q PD + V KG C ++
Sbjct: 937 CGENCLTTKF--GCCPDGKTTAKGSHNEGCGCEFAQYGCCPDGKSVAKGAGFYGCP-ESC 993
Query: 580 NNAYWSCXQDTCMMSEDLVNDVNXQGTPWKATTY 681
+ + C C + N +G P + T Y
Sbjct: 994 AQSQFGC----CPDGKTRARGENKEGCPCQYTRY 1023
>Z70757-1|CAA94805.1| 497|Caenorhabditis elegans Hypothetical
protein ZK287.1 protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Frame = +1
Query: 337 DNKCC--YNRKDDCSV---PILGTLCYCDEFCDHTRHHDDCCPDYKKVCS----PPQITS 489
+N CC + CS P + CDE C+ TR+ DC CS P +
Sbjct: 9 NNYCCECVASQGRCSADTCPCVAARKTCDEHCESTRYRGDCLNQAICKCSCEVDPAKPAK 68
Query: 490 VSCEYEQQTYAPDDQVNKGCN-LCTCK 567
+C ++ ++ +GC+ LC CK
Sbjct: 69 NACAKSERCDCL--RIKEGCSKLCACK 93
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +1
Query: 292 GPELLNGRYCAARPDDNKCCYNRKDDCSVPILGTLCYCDEFCDHTRHHDDCCPDYKKVCS 471
GPE N +R +CC+ ++ C + + C C + D C + C
Sbjct: 63 GPETRNETAAVSRAK-RQCCFAAQNSCCPQQVQSQCNCAALQIQVQQCD-CANMLQTQCG 120
Query: 472 PPQITSVSCE 501
P I+S SC+
Sbjct: 121 CPSISSPSCD 130
>Z81468-2|CAN99666.1| 950|Caenorhabditis elegans Hypothetical
protein C13B4.1b protein.
Length = 950
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 508 QQTYAPDDQVNKGCNLCTCKVDNDNNAYWSCXQDTCMMSEDLVNDVNXQG 657
QQ A Q++KGC++ N WS D ++ E VN +G
Sbjct: 17 QQFDASQCQISKGCHIPESTQSNGMGVAWSLLDDETLLLELFVNSDEEKG 66
>Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical
protein C13B4.1a protein.
Length = 1010
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 508 QQTYAPDDQVNKGCNLCTCKVDNDNNAYWSCXQDTCMMSEDLVNDVNXQG 657
QQ A Q++KGC++ N WS D ++ E VN +G
Sbjct: 17 QQFDASQCQISKGCHIPESTQSNGMGVAWSLLDDETLLLELFVNSDEEKG 66
>U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical
protein C05D9.3 protein.
Length = 423
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Frame = +1
Query: 415 CDHTRHHDDC-CPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCTCKVDNDNNAY 591
CD +R D C CP S C + + C C C +
Sbjct: 243 CDQSRGGDKCECPLASHGVSKASELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTVTGKF 302
Query: 592 WSCXQDTCMMS 624
C D+C ++
Sbjct: 303 CQCDNDSCPLA 313
>Z81111-2|CAB03266.1| 535|Caenorhabditis elegans Hypothetical
protein T01G5.2 protein.
Length = 535
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 460 SCNRDSSHRGVLCDHRTRRNSREYPISALSNRLFDCS 350
+ N + HRG +C H+++ + E A + LFD S
Sbjct: 407 NANTLARHRGAICLHKSQMKNTEVLKKAFKSVLFDAS 443
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 280 LAYSGPELLNGRYCAARPDDNKCCYNRKDDCSVPILGTLC 399
LA P +LN +Y AA DD C + D + + G +C
Sbjct: 165 LASKTPTILNDQYFAATLDDTNCDGMLEGDAARVLRGYIC 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,975,139
Number of Sequences: 27780
Number of extensions: 347605
Number of successful extensions: 1001
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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