Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2419
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 242 8e-64
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 242 1e-63
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 242 1e-63
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 242 1e-63
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 242 1e-63
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 242 1e-63
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 238 2e-62
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 176 6e-44
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 109 1e-23
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 53 1e-06
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 242 bits (593), Expect = 8e-64
Identities = 115/206 (55%), Positives = 146/206 (70%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 94 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 153
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 154 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLME 213
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P KRWN+ K+
Sbjct: 214 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKM 271
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 272 SLAQKKDRVAQKKASFLRAQERAAES 297
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 242 bits (592), Expect = 1e-63
Identities = 115/206 (55%), Positives = 146/206 (70%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 94 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 153
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 154 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLME 213
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P KRWN+ K+
Sbjct: 214 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKM 271
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 272 SLAQKKDRVAQKKASFLRAQERAAES 297
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 242 bits (592), Expect = 1e-63
Identities = 115/206 (55%), Positives = 146/206 (70%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 94 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 153
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 154 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLME 213
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P KRWN+ K+
Sbjct: 214 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKM 271
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 272 SLAQKKDRVAQKKASFLRAQERAAES 297
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 242 bits (592), Expect = 1e-63
Identities = 115/206 (55%), Positives = 146/206 (70%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 94 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 153
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 154 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLME 213
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P KRWN+ K+
Sbjct: 214 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKM 271
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 272 SLAQKKDRVAQKKASFLRAQERAAES 297
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 242 bits (592), Expect = 1e-63
Identities = 115/206 (55%), Positives = 146/206 (70%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 94 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 153
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 154 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLME 213
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P KRWN+ K+
Sbjct: 214 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKM 271
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 272 SLAQKKDRVAQKKASFLRAQERAAES 297
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 242 bits (592), Expect = 1e-63
Identities = 114/206 (55%), Positives = 146/206 (70%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 94 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 153
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 154 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLME 213
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P +RWN+ K+
Sbjct: 214 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKERWNRPKM 271
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 272 SLAQKKDRVAQKKASFLRAQERAAES 297
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 238 bits (582), Expect = 2e-62
Identities = 115/206 (55%), Positives = 146/206 (70%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 101 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 160
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 161 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLME 220
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P KRWN+ K+
Sbjct: 221 EDEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKM 277
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 278 SLAQKKDRVAQKKASFLRAQERAAES 303
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 176 bits (429), Expect = 6e-44
Identities = 83/146 (56%), Positives = 110/146 (75%)
Frame = -2
Query: 494 TTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQ 315
TTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L +
Sbjct: 2 TTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLME 61
Query: 314 DDEDSFKRQFSKYIKLGVXADAIEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKL 135
+DED++K+QFS+YIK V D +E YKKAH AIR +P KRWN+ K+
Sbjct: 62 EDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKM 119
Query: 134 TLAERKNRIKQKKASFIKRLQAQAEA 57
+LA++K+R+ QKKASF++ + AE+
Sbjct: 120 SLAQKKDRVAQKKASFLRAQERAAES 145
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 109 bits (261), Expect = 1e-23
Identities = 49/82 (59%), Positives = 57/82 (69%)
Frame = -2
Query: 674 NYAAAYSTGXXXXXXXXXXXXLDXLYTGTTDVXGDEYNVEPVDNGPGAFRCYLDVGLARX 495
NYAAAY TG +D +Y G +V GDEYNVE +D PGAF CYLD GLAR
Sbjct: 44 NYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLART 103
Query: 494 TTGARVFGAMKGAVDGGLNVPH 429
TTG +VFGA+KGAVDGGL++PH
Sbjct: 104 TTGNKVFGALKGAVDGGLSIPH 125
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 52.8 bits (121), Expect = 1e-06
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = -2
Query: 248 IEAXYKKAHEAIRADPSXXXXXXXXXXXXXKRWNKRKLTLAERKNRIKQKKASFIKRLQA 69
+E YKKAH AIR +P KRWN+ K++LA++K+R+ QKKASF++ +
Sbjct: 1 MEEMYKKAHAAIRENP--VYEKKPKKEVKKKRWNRPKMSLAQKKDRVAQKKASFLRAQER 58
Query: 68 QAEA 57
AE+
Sbjct: 59 AAES 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,474,524
Number of Sequences: 237096
Number of extensions: 1501670
Number of successful extensions: 3440
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3429
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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