Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2418
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical pr... 183 8e-47
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 174 5e-44
Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical p... 170 6e-43
Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 134 4e-32
Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical pr... 97 1e-20
>Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical
protein K11H3.1a protein.
Length = 371
Score = 183 bits (446), Expect = 8e-47
Identities = 92/171 (53%), Positives = 119/171 (69%), Gaps = 1/171 (0%)
Frame = +1
Query: 43 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 219
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 9 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 64
Query: 220 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 399
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 65 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 124
Query: 400 TLLGKIKPTAAALSLIKGFDIAEGGGIDLISHIITRCLKIPCAVLMGANIA 552
L+GKI A+SLIKG + GG+ LIS I LKI +VLMGAN+A
Sbjct: 125 KLVGKIPADTQAISLIKGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLA 175
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 174 bits (423), Expect = 5e-44
Identities = 94/180 (52%), Positives = 121/180 (67%), Gaps = 10/180 (5%)
Frame = +1
Query: 43 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 219
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 21 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 76
Query: 220 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 399
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 77 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 136
Query: 400 TLLGKIKPTAAALSLIKG--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANIA 552
L+GKI A+SLIKG FD + GG+ LIS I LKI +VLMGAN+A
Sbjct: 137 KLVGKIPADTQAISLIKGISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLA 196
>Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical
protein K11H3.1d protein.
Length = 360
Score = 170 bits (414), Expect = 6e-43
Identities = 90/163 (55%), Positives = 115/163 (70%), Gaps = 10/163 (6%)
Frame = +1
Query: 94 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 270
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 271 VKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIK 450
+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIK
Sbjct: 62 IKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIK 121
Query: 451 G--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANIA 552
G FD + GG+ LIS I LKI +VLMGAN+A
Sbjct: 122 GISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANLA 164
>Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical
protein F47G4.3 protein.
Length = 374
Score = 134 bits (325), Expect = 4e-32
Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 7/166 (4%)
Frame = +1
Query: 97 KNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGK---KLTEIINETH 264
+ K+ IVG GNWGSAIA +VG+ + F+ V++W + G + E IN TH
Sbjct: 21 RKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIWCRDSRKPGDLSPSIAETINSTH 80
Query: 265 ENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSL 444
EN KYLPG ++P NVVA ++EA + A +LI VVPHQ + IC L GK++ A A+SL
Sbjct: 81 ENPKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISL 140
Query: 445 IKGFDIA-EGGGI--DLISHIITRCLKIPCAVLMGANIASGXC*GK 573
KG + E G I LIS I R L + C+VLMGAN+A GK
Sbjct: 141 TKGISSSCENGEIKMQLISEDIERALGVQCSVLMGANLAGEVADGK 186
>Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical
protein K11H3.1c protein.
Length = 304
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +1
Query: 94 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 270
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 271 VKYLPGHKLPSNV 309
+KYLPG LP+NV
Sbjct: 62 IKYLPGKVLPNNV 74
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 451 GFDIAEGGGIDLISHIITRCLKIPCAVLMGANIA 552
G + GG+ LIS I LKI +VLMGAN+A
Sbjct: 75 GVSTEKRGGLKLISEEIKEILKIEVSVLMGANLA 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,401,215
Number of Sequences: 27780
Number of extensions: 262637
Number of successful extensions: 880
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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