Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2417
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z71178-17|CAD44089.1|  898|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z71178-14|CAA94886.3|  894|Caenorhabditis elegans Hypothetical p...    29   2.7  
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    29   2.7  
AL021478-3|CAF32233.1|  898|Caenorhabditis elegans Hypothetical ...    29   2.7  
AL021478-1|CAC35857.2|  894|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z81098-9|CAB03185.3|  364|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81079-9|CAB03085.3|  364|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U58758-14|AAB93433.2|  842|Caenorhabditis elegans High incidence...    28   8.1  
AF178755-1|AAD52669.1|  842|Caenorhabditis elegans HIM-14 protei...    28   8.1  

>Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 630 ISIHSHCCPLCINIXWVSY 686
           + I  HCCPLC +  W  Y
Sbjct: 781 VPIEGHCCPLCKDAKWSPY 799


>Z71178-17|CAD44089.1|  898|Caenorhabditis elegans Hypothetical
           protein B0024.14d protein.
          Length = 898

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 630 ISIHSHCCPLCINIXWVSY 686
           + I  HCCPLC +  W  Y
Sbjct: 715 VPIEGHCCPLCKDAKWSPY 733


>Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 630 ISIHSHCCPLCINIXWVSY 686
           + I  HCCPLC +  W  Y
Sbjct: 781 VPIEGHCCPLCKDAKWSPY 799


>Z71178-14|CAA94886.3|  894|Caenorhabditis elegans Hypothetical
           protein B0024.14a protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 630 ISIHSHCCPLCINIXWVSY 686
           + I  HCCPLC +  W  Y
Sbjct: 715 VPIEGHCCPLCKDAKWSPY 733


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 417 QLHPIQNRLPIRGHQ-QCAKCWPAFQDFA*SLVNATVKSYLLQLN 548
           ++HPIQ+R+  RGH  QC  C P F   A +L +      + Q+N
Sbjct: 96  KIHPIQDRM-ARGHALQCGFCSPGFVMSAYALFSNQPNPTIQQIN 139


>AL021478-3|CAF32233.1|  898|Caenorhabditis elegans Hypothetical
           protein B0024.14d protein.
          Length = 898

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 630 ISIHSHCCPLCINIXWVSY 686
           + I  HCCPLC +  W  Y
Sbjct: 715 VPIEGHCCPLCKDAKWSPY 733


>AL021478-1|CAC35857.2|  894|Caenorhabditis elegans Hypothetical
           protein B0024.14a protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 630 ISIHSHCCPLCINIXWVSY 686
           + I  HCCPLC +  W  Y
Sbjct: 715 VPIEGHCCPLCKDAKWSPY 733


>Z81098-9|CAB03185.3|  364|Caenorhabditis elegans Hypothetical
           protein K07A12.5 protein.
          Length = 364

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 431 TEPPPNTRPSTMREVLASIPGFCLKPRKRNSKKLST 538
           TEPP NT  + M E LASI     K  +RN+  ++T
Sbjct: 246 TEPPSNTANTIMSESLASINARYKKSCERNAVFMNT 281


>Z81079-9|CAB03085.3|  364|Caenorhabditis elegans Hypothetical
           protein K07A12.5 protein.
          Length = 364

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 431 TEPPPNTRPSTMREVLASIPGFCLKPRKRNSKKLST 538
           TEPP NT  + M E LASI     K  +RN+  ++T
Sbjct: 246 TEPPSNTANTIMSESLASINARYKKSCERNAVFMNT 281


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 417 QLHPIQNRLPIRGHQ-QCAKCWPAFQDFA*SLVNATVKSYLLQLN 548
           ++HPIQ+R+  RGH  QC  C P F   A +L+       + Q+N
Sbjct: 96  KIHPIQDRM-ARGHAVQCGFCSPGFVMSAYALLRNHPNPTIEQIN 139


>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
           protein F55B11.1 protein.
          Length = 1358

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 417 QLHPIQNRLPIRGHQQCAKCWPAF 488
           +LHP+Q RL      QC  C P F
Sbjct: 106 RLHPVQERLAKAHGSQCGFCTPGF 129


>U58758-14|AAB93433.2|  842|Caenorhabditis elegans High incidence of
           males (increasedx chromosome loss) protein 14 protein.
          Length = 842

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = -3

Query: 217 RRVIRIFHGGSSIRRS*IK---LHYCFKTEIASCYHTPYFQPIVFKSGLSTNF 68
           R +   FHG SS+R S  +    HY F T  A     P +   VF++  +  F
Sbjct: 425 REIAEYFHGNSSVRLSFSQSRGFHYTFVTRQAESVTIPRYFLDVFRNRTTVTF 477


>AF178755-1|AAD52669.1|  842|Caenorhabditis elegans HIM-14 protein
           protein.
          Length = 842

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = -3

Query: 217 RRVIRIFHGGSSIRRS*IK---LHYCFKTEIASCYHTPYFQPIVFKSGLSTNF 68
           R +   FHG SS+R S  +    HY F T  A     P +   VF++  +  F
Sbjct: 425 REIAEYFHGNSSVRLSFSQSRGFHYTFVTRQAESVTIPRYFLDVFRNRTTVTF 477


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,213,741
Number of Sequences: 27780
Number of extensions: 291046
Number of successful extensions: 770
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)