Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2403
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.61 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.61 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.61 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.61 
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    26   1.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   1.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.3  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   10.0 

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  VSDACKTTYEEIKKDKKHRYVVFYIRD 147
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  VSDACKTTYEEIKKDKKHRYVVFYIRD 147
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHPHPIIYLRD 121


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  VSDACKTTYEEIKKDKKHRYVVFYIRD 147
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 47  ILSACSPYFEQIFVENKHPHPIIYLRD 73


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  VSDACKTTYEEIKKDKKHRYVVFYIRD 147
           +  AC   +E+I  + KH + + Y+RD
Sbjct: 95  ILSACSPYFEQIFVENKHLHPIIYLRD 121


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 322 SGRASVSC*PPTCPGTGAC 266
           +GR +V C PP  PG  AC
Sbjct: 31  NGRQNVGCNPPGIPGGPAC 49


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 238  CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPXTAKVKKKMLYSSSFDAL 390
            CR G        +C G  E ++      M  CP  A++++K+L  ++ DA+
Sbjct: 955  CRMGFTPSPDCIRCTGVPETAEHA----MFECPRFAEIRQKLLGEANTDAI 1001


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 340 TAKVKKKMLYSSSFDALK 393
           TAKV +K+ YSS+F  L+
Sbjct: 258 TAKVFQKIFYSSAFSKLR 275


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 81  QDHLRGDQEGQEASLR 128
           ++H R  QEG  ASLR
Sbjct: 40  EEHARAGQEGNVASLR 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,822
Number of Sequences: 2352
Number of extensions: 9247
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)