Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2397
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 229 2e-60
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 215 4e-56
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 212 2e-55
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 206 2e-53
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 107 9e-24
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 59 4e-09
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 29 3.9
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 28 6.9
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 6.9
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 28 6.9
12_02_1159 + 26585042-26585441,26585520-26585608,26585670-265857... 28 9.1
08_01_0355 - 3122374-3122520,3122912-3123047,3123124-3123221,312... 28 9.1
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 9.1
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 229 bits (560), Expect = 2e-60
Identities = 112/214 (52%), Positives = 142/214 (66%), Gaps = 2/214 (0%)
Frame = +2
Query: 68 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 241
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 242 SRKFKPFSNXGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQXDMHGETPYEIMFGPDIC 421
S ++ FSN K LV+QF+VKHEQ +DCGGGY+K+ ++Q G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 422 GPGTKXVHVIFSYXGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKS*IWRPX 601
G TK VH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +LIDN +
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIY 207
Query: 602 SRLGLPXA*KIXDPGAXKPEDWDDKPTXXXPEXK 703
+ +I DP A KPEDWDDK PE K
Sbjct: 208 EHWDILPPKQIKDPEAKKPEDWDDKEYIPDPEDK 241
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 7/32 (21%)
Frame = +2
Query: 629 KIXDPGAXKPEDWDDK-------PTXXXPEXK 703
+I DP A KPEDWDD+ PT PE K
Sbjct: 252 EIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYK 283
Score = 31.1 bits (67), Expect = 0.98
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 691 PRXQKPEDWDKPEHFPXPD 747
P +KPEDWD E+ P P+
Sbjct: 221 PEAKKPEDWDDKEYIPDPE 239
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 215 bits (524), Expect = 4e-56
Identities = 108/224 (48%), Positives = 137/224 (61%), Gaps = 12/224 (5%)
Frame = +2
Query: 68 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPEDD----------KGLK 211
+VFF+EKF DD WE WV SE + G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 212 TSEDARFYALSRKFKPFSNXGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQXDMHGETP 391
TSED RFYA+S K+ FS+ K LV+QF+VKHEQ +DCGGGY+K+ ++Q GETP
Sbjct: 85 TSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETP 144
Query: 392 YEIMFGPDICGPGTKXVHVIFSYXGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID 571
Y IMFGPDICG TK VH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +LID
Sbjct: 145 YSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILID 204
Query: 572 NEKS*IWRPXSRLGLPXA*KIXDPGAXKPEDWDDKPTXXXPEXK 703
N + + DP A KPEDWDD PE K
Sbjct: 205 NTEKQTGSIYDDWNIIPPKNKRDPEAKKPEDWDDNEYIPDPEDK 248
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 7/32 (21%)
Frame = +2
Query: 629 KIXDPGAXKPEDWDDK-------PTXXXPEXK 703
+I DP A KPEDWDD+ PT PE K
Sbjct: 259 EITDPEATKPEDWDDEEDGEWTAPTIPNPEYK 290
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 691 PRXQKPEDWDKPEHFPXPD 747
P +KPEDWD E+ P P+
Sbjct: 228 PEAKKPEDWDDNEYIPDPE 246
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 212 bits (518), Expect = 2e-55
Identities = 99/212 (46%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Frame = +2
Query: 68 DVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 241
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 242 SRKFKPFSNXGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQXDMHGETPYEIMFGPDIC 421
S K FSN G+ LV+Q+++K EQDI+CGGGY+K+ + Q G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 422 GPGTKXVHVIFSYXGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKS*IWRPX 601
G TK +H+I SY G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN +
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMY 205
Query: 602 SRLGLPXA*KIXDPGAXKPEDWDDKPTXXXPE 697
+ + KI D A KP+DWDD+ P+
Sbjct: 206 TDWDILPPRKIKDVHAKKPKDWDDREYIEDPD 237
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 206 bits (502), Expect = 2e-53
Identities = 96/215 (44%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Frame = +2
Query: 59 INCDVFFEEKFPDDSWESNWVYSEHPXKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 232
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 233 YALSRKFKPFSNXGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQXDMHGETPYEIMFGP 412
+A+S KF FSN + LVVQ+++K EQDI+CGG Y+K+ + Q G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 413 DICGPGTKXVHVIFSYXGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKS*IW 592
DICG TK +H+I SY G+N+ IKKD++C+ D TH YT I++PD +Y +L+DN +
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFG 202
Query: 593 RPXSRLGLPXA*KIXDPGAXKPEDWDDKPTXXXPE 697
+ + KI + A KP+DWDD+ P+
Sbjct: 203 SMYTDWDILPPRKIKESNAKKPKDWDDREYIEDPD 237
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 107 bits (257), Expect = 9e-24
Identities = 77/224 (34%), Positives = 110/224 (49%), Gaps = 14/224 (6%)
Frame = +2
Query: 68 DVFFEEKFPDDSWESNWVYSEHPXKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 247
D F E F D+S+E WV S + G +K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLSGKDDYK-GVWKHEK----SDGHEDYGLLVSEKAKKYAIIK 77
Query: 248 KF-KPFSNXGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQXDMHGETPYEIMFGPD 415
+ +P + +V+QF V+ + ++CGG YLK D + + ETPY IMFGPD
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPD 137
Query: 416 ICGPGTKXVHVIFSY----XGK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNE 577
CG T VH I + GK H +K D +H+YT I+KPDN +L+D E
Sbjct: 138 KCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGE 196
Query: 578 K----S*IWRPXSRLGLPXA*KIXDPGAXKPEDWDDKPTXXXPE 697
+ + + L + I DP KPEDWD++ P+
Sbjct: 197 EKKKANFLSADDFEPSLIPSKTIPDPDDKKPEDWDERAKIPDPD 240
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 691 PRXQKPEDWDKPEHFPXPDA 750
P +KPEDWD+ P PDA
Sbjct: 222 PDDKKPEDWDERAKIPDPDA 241
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 629 KIXDPGAXKPEDWDDK 676
+I DP A KPEDWDD+
Sbjct: 273 EIDDPEANKPEDWDDE 288
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 629 KIXDPGAXKPEDWDD 673
KI DP A KP+DWD+
Sbjct: 235 KIPDPDAVKPDDWDE 249
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +2
Query: 464 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDN 574
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDN 551
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 324 QSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPN 145
+S+ L+ N + G+P L GLN +++++ + P+ SSG L FP + N
Sbjct: 738 KSIGALDLSNNQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNN 796
Query: 144 SFXGCSL 124
G L
Sbjct: 797 GLCGIPL 803
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 574 IVNEDFIGVVRFHNQSVQMCVDI 506
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 417 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 274
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 388 GLSVHVXLLQFAVKDLKVSASTVNVLFMFDSELDDQGFTXITERFELTGESIEPRIFR 215
G V LL L ++ +T +V+ ++DS+ + Q +R G+ E ++FR
Sbjct: 598 GSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFR 655
>12_02_1159 +
26585042-26585441,26585520-26585608,26585670-26585720,
26586189-26586282,26586451-26586512,26586589-26586671,
26586793-26586901,26587010-26587051,26587152-26587316,
26588165-26588341,26588820-26588984,26589069-26589332
Length = 566
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 416 ICGPGTKXVHVIFSYXGKNHLIKKDIRCKD 505
I GPG + I S+ N+LI +D+ KD
Sbjct: 330 IVGPGDELKEFILSFCTHNYLIVQDVELKD 359
>08_01_0355 -
3122374-3122520,3122912-3123047,3123124-3123221,
3123724-3123801,3123876-3123945,3124452-3124516,
3124606-3124686,3124822-3124926,3125002-3125085,
3125175-3125250,3125358-3125436,3125526-3125646,
3125768-3125827
Length = 399
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 149 GKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPF--SNXGKPLVVQFTVKHEQDI 319
G+ + A DPE D+ LK EDA AL++K + N K ++ ++++QD+
Sbjct: 244 GRVRDWARTHSGDPEIDEALKKGEDAGL-ALAKKVYAYIHKNGYKTKLMAAAIRNKQDV 301
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 102 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 16
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,470,824
Number of Sequences: 37544
Number of extensions: 397383
Number of successful extensions: 1006
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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