Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2395
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein.       31   4.0  
AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF p...    31   4.0  
AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein.     31   4.0  

>BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein.
          Length = 1320

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 41   QTAPTQEMEQPEGQKAQDGAPVQMXLPWGLTPADLHAIYRSAXHAIDQSRRE 196
            Q  P Q+ +QP  Q  Q   P Q    WG+  + LH+++++      QS  E
Sbjct: 1228 QQLPQQQQQQPPQQPPQQ--PQQQDSVWGMNHSTLHSVFQTNQSNNQQSNFE 1277


>AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF
            protein 2 protein.
          Length = 1299

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 41   QTAPTQEMEQPEGQKAQDGAPVQMXLPWGLTPADLHAIYRSAXHAIDQSRRE 196
            Q  P Q+ +QP  Q  Q   P Q    WG+  + LH+++++      QS  E
Sbjct: 1207 QQLPQQQQQQPPQQPPQQ--PQQQDSVWGMNHSTLHSVFQTNQSNNQQSNFE 1256


>AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein.
          Length = 1329

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 41   QTAPTQEMEQPEGQKAQDGAPVQMXLPWGLTPADLHAIYRSAXHAIDQSRRE 196
            Q  P Q+ +QP  Q  Q   P Q    WG+  + LH+++++      QS  E
Sbjct: 1237 QQLPQQQQQQPPQQPPQQ--PQQQDSVWGMNHSTLHSVFQTNQSNNQQSNFE 1286


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,636,099
Number of Sequences: 237096
Number of extensions: 1703294
Number of successful extensions: 4500
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4500
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)