Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2390
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 273 5e-73
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 273 5e-73
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 273 5e-73
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 273 5e-73
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 273 5e-73
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 273 5e-73
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 271 2e-72
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 2e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 152 1e-36
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 52 3e-06
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 273 bits (669), Expect = 5e-73
Identities = 134/229 (58%), Positives = 157/229 (68%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 391
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 392 XXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGGPQCSSFHQKI 571
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG ++
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 572 PWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVLNRMDXDXFKXXFRQVXK 718
P ++FNAEVHR H++ + + L D D +K F Q K
Sbjct: 181 PGYDSESKEFNAEVHR-KHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 273 bits (669), Expect = 5e-73
Identities = 134/229 (58%), Positives = 157/229 (68%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 391
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 392 XXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGGPQCSSFHQKI 571
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG ++
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 572 PWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVLNRMDXDXFKXXFRQVXK 718
P ++FNAEVHR H++ + + L D D +K F Q K
Sbjct: 181 PGYDSESKEFNAEVHR-KHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 273 bits (669), Expect = 5e-73
Identities = 134/229 (58%), Positives = 157/229 (68%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 391
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 392 XXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGGPQCSSFHQKI 571
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG ++
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 572 PWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVLNRMDXDXFKXXFRQVXK 718
P ++FNAEVHR H++ + + L D D +K F Q K
Sbjct: 181 PGYDSESKEFNAEVHR-KHIMGQNVADYMRCLMEEDEDAYKKQFSQYIK 228
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 273 bits (669), Expect = 5e-73
Identities = 134/229 (58%), Positives = 157/229 (68%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 391
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 392 XXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGGPQCSSFHQKI 571
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG ++
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 572 PWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVLNRMDXDXFKXXFRQVXK 718
P ++FNAEVHR H++ + + L D D +K F Q K
Sbjct: 181 PGYDSESKEFNAEVHR-KHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 273 bits (669), Expect = 5e-73
Identities = 134/229 (58%), Positives = 157/229 (68%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 391
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 392 XXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGGPQCSSFHQKI 571
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG ++
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 572 PWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVLNRMDXDXFKXXFRQVXK 718
P ++FNAEVHR H++ + + L D D +K F Q K
Sbjct: 181 PGYDSESKEFNAEVHR-KHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 273 bits (669), Expect = 5e-73
Identities = 134/229 (58%), Positives = 157/229 (68%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 391
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 392 XXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGGPQCSSFHQKI 571
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG ++
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187
Query: 572 PWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVLNRMDXDXFKXXFRQVXK 718
P ++FNAEVHR H++ + + L D D +K F Q K
Sbjct: 188 PGYDSESKEFNAEVHR-KHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 235
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 271 bits (664), Expect = 2e-72
Identities = 133/229 (58%), Positives = 156/229 (68%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 391
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 392 XXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGGPQCSSFHQKI 571
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG ++
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 572 PWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVLNRMDXDXFKXXFRQVXK 718
P ++FNAEVHR H++ + + L D D +K F Q K
Sbjct: 181 PGYDSESKEFNAEVHR-KHIMGQNVADYMRYLMEEDEDAYKKQFSQYIK 228
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 192 bits (467), Expect = 2e-48
Identities = 84/98 (85%), Positives = 95/98 (96%)
Frame = +2
Query: 32 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 211
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 212 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 325
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 152 bits (369), Expect = 1e-36
Identities = 71/120 (59%), Positives = 83/120 (69%)
Frame = +2
Query: 182 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 361
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 362 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVXLARTTTGARVFGAMXGAVDGG 541
EYNVE +D PGAF CYLD LARTTTG +VFGA+ GAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 51.6 bits (118), Expect = 3e-06
Identities = 30/77 (38%), Positives = 41/77 (53%)
Frame = +2
Query: 488 TTTGARVFGAMXGAVDGGPQCSSFHQKIPWL*CXIQKFNAEVHRGSHLLVCMLLNT*XVL 667
TTTG +VFGA+ GAVDGG ++ P ++FNAEVHR H++ + + L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR-KHIMGQNVADYMRYL 59
Query: 668 NRMDXDXFKXXFRQVXK 718
D D +K F Q K
Sbjct: 60 MEEDEDAYKKQFSQYIK 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,489,764
Number of Sequences: 237096
Number of extensions: 2100224
Number of successful extensions: 3476
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3460
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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