Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2387
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    41   4e-05
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   3.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.2  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 640 AVVTXPAYFNDAQRQATKDA 699
           AV+T PAYFND+QRQATKDA
Sbjct: 2   AVITVPAYFNDSQRQATKDA 21


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 277 CRHRHMSKWYPNRYR*LCRCPYLSPSCRR 191
           C +R   +WY    +    CPY +  C R
Sbjct: 302 CYYRFRLEWYRTLSKACYNCPYNATDCER 330


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = -2

Query: 567 FRSKYFVAL*SLYLNMRFAVLFNDLEGEELNIMLYSLVTPFTTNQTLGIKDSVFRVGS 394
           F  +Y + L  L+ +M    ++ND+  + +NI   +    + T+  +  KD     GS
Sbjct: 447 FGGRYIILLMGLF-SMYTGFVYNDIFSKSMNIFGSAWSVNYNTSTVMTNKDLTLNPGS 503


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2

Query: 507 LFNDLEGEELNIMLYSLVTPFTTNQTLGIKDSVF 406
           +F  L GE+ N+++Y  +  +    +LGI  S++
Sbjct: 661 VFQILTGEDWNMVMYDGIQAYGGVASLGIIASIY 694


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,002
Number of Sequences: 2352
Number of extensions: 11521
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)