Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2378
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U69263-1|AAC51260.2| 956|Homo sapiens matrilin-2 precursor prot... 37 0.062
BC016394-1|AAH16394.1| 715|Homo sapiens MATN2 protein protein. 37 0.062
BC010444-1|AAH10444.1| 937|Homo sapiens matrilin 2 protein. 37 0.062
AL833931-1|CAD38787.1| 1016|Homo sapiens hypothetical protein pr... 37 0.062
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 37 0.082
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 36 0.19
AY911311-1|AAX81434.1| 315|Homo sapiens chitinase family protei... 35 0.25
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 35 0.33
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 34 0.44
BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein. 34 0.58
BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein. 34 0.58
BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein. 34 0.58
BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein. 34 0.58
BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein. 34 0.58
AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protei... 34 0.58
AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protei... 34 0.58
AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protei... 34 0.58
AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protei... 34 0.58
AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic ... 34 0.58
AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic ... 34 0.58
AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic ... 34 0.58
AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic ... 34 0.58
AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic ... 34 0.58
AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic ... 34 0.58
AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitin... 34 0.58
AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitina... 34 0.58
AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitina... 34 0.58
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 33 0.76
BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2 (Drosoph... 33 0.76
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 33 0.76
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 33 0.76
AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein. 33 0.76
AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellula... 33 0.76
AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein. 33 0.76
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 33 1.0
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 33 1.0
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 33 1.0
BC103695-1|AAI03696.1| 466|Homo sapiens chitinase 1 (chitotrios... 33 1.0
BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein. 33 1.0
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 33 1.0
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 33 1.0
U29615-1|AAC50246.1| 466|Homo sapiens chitotriosidase precursor... 33 1.3
BC105682-1|AAI05683.1| 466|Homo sapiens chitinase 1 (chitotrios... 33 1.3
BC105681-1|AAI05682.1| 466|Homo sapiens chitinase 1 (chitotrios... 33 1.3
BC105680-1|AAI05681.1| 466|Homo sapiens chitinase 1 (chitotrios... 33 1.3
BC069614-1|AAH69614.1| 454|Homo sapiens CHIT1 protein protein. 33 1.3
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 32 1.8
BC017066-1|AAH17066.1| 444|Homo sapiens proline-rich coiled-coi... 32 2.3
AL831963-1|CAD38605.1| 445|Homo sapiens hypothetical protein pr... 32 2.3
AK057437-1|BAB71487.1| 445|Homo sapiens protein ( Homo sapiens ... 32 2.3
AJ515429-1|CAD56439.1| 445|Homo sapiens hypothetical protein pr... 32 2.3
AJ515428-1|CAD56438.1| 445|Homo sapiens hypothetical protein pr... 32 2.3
AJ515158-1|CAD56470.1| 464|Homo sapiens hypothetical protein pr... 32 2.3
AJ496322-1|CAD42881.1| 311|Homo sapiens hypothetical protein pr... 32 2.3
AJ441110-1|CAD29585.2| 462|Homo sapiens hypothetical protein pr... 32 2.3
AJ427339-1|CAD22113.1| 445|Homo sapiens hypothetical protein pr... 32 2.3
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 31 4.1
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t... 31 5.4
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t... 31 5.4
AK075489-1|BAC11648.1| 451|Homo sapiens rase 7. protein. 31 5.4
D28476-1|BAA05837.2| 2005|Homo sapiens KIAA0045 protein. 30 7.1
BC114556-1|AAI14557.1| 2040|Homo sapiens TRIP12 protein protein. 30 7.1
BC113891-1|AAI13892.1| 1722|Homo sapiens TRIP12 protein protein. 30 7.1
AC093384-2|AAY14681.1| 1299|Homo sapiens unknown protein. 30 7.1
L00352-1|AAA56833.1| 860|Homo sapiens low density lipoprotein r... 30 9.4
BT007361-1|AAP36025.1| 860|Homo sapiens low density lipoprotein... 30 9.4
BC014514-1|AAH14514.1| 860|Homo sapiens low density lipoprotein... 30 9.4
AY324609-1|AAP72971.1| 860|Homo sapiens low density lipoprotein... 30 9.4
AY114155-1|AAM56036.1| 860|Homo sapiens low density lipoprotein... 30 9.4
AF217403-1|AAF24515.1| 837|Homo sapiens low density lipoprotein... 30 9.4
AB209409-1|BAD92646.1| 870|Homo sapiens low density lipoprotein... 30 9.4
>U69263-1|AAC51260.2| 956|Homo sapiens matrilin-2 precursor
protein.
Length = 956
Score = 37.1 bits (82), Expect = 0.062
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 15/160 (9%)
Frame = +1
Query: 88 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKL-CPDGLVFDPTIRKINKCDQPFN 264
A+A +C A D ++ C+ ECV+ + C +G +P + K D +
Sbjct: 310 ALAEDGKRCVAVDYCASENHGCEH--ECVNADGSYLCQCHEGFALNPDKKTCTKIDYCAS 367
Query: 265 VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF-----------YNCIE-GEATEVK 408
+ G + E + C GF +PD C + C+ E+ +
Sbjct: 368 SNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCR 427
Query: 409 CTAGLHFDEYSGTCVWPDSAGRQ--GCNEQQKKTKDGFEC 522
C G D TC D +Q GC + T+D F C
Sbjct: 428 CHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVC 467
>BC016394-1|AAH16394.1| 715|Homo sapiens MATN2 protein protein.
Length = 715
Score = 37.1 bits (82), Expect = 0.062
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 15/160 (9%)
Frame = +1
Query: 88 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKL-CPDGLVFDPTIRKINKCDQPFN 264
A+A +C A D ++ C+ ECV+ + C +G +P + K D +
Sbjct: 69 ALAEDGKRCVAVDYCASENHGCEH--ECVNADGSYLCQCHEGFALNPDEKTCTKIDYCAS 126
Query: 265 VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF-----------YNCIE-GEATEVK 408
+ G + E + C GF +PD C + C+ E+ +
Sbjct: 127 SNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCR 186
Query: 409 CTAGLHFDEYSGTCVWPDSAGRQ--GCNEQQKKTKDGFEC 522
C G D TC D +Q GC + T+D F C
Sbjct: 187 CHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVC 226
>BC010444-1|AAH10444.1| 937|Homo sapiens matrilin 2 protein.
Length = 937
Score = 37.1 bits (82), Expect = 0.062
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 15/160 (9%)
Frame = +1
Query: 88 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKL-CPDGLVFDPTIRKINKCDQPFN 264
A+A +C A D ++ C+ ECV+ + C +G +P + K D +
Sbjct: 310 ALAEDGKRCVAVDYCASENHGCEH--ECVNADGSYLCQCHEGFALNPDEKTCTKIDYCAS 367
Query: 265 VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF-----------YNCIE-GEATEVK 408
+ G + E + C GF +PD C + C+ E+ +
Sbjct: 368 SNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCR 427
Query: 409 CTAGLHFDEYSGTCVWPDSAGRQ--GCNEQQKKTKDGFEC 522
C G D TC D +Q GC + T+D F C
Sbjct: 428 CHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVC 467
>AL833931-1|CAD38787.1| 1016|Homo sapiens hypothetical protein
protein.
Length = 1016
Score = 37.1 bits (82), Expect = 0.062
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 15/160 (9%)
Frame = +1
Query: 88 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKL-CPDGLVFDPTIRKINKCDQPFN 264
A+A +C A D ++ C+ ECV+ + C +G +P + K D +
Sbjct: 370 ALAEDGKRCVAVDYCASENHGCEH--ECVNADGSYLCQCHEGFALNPDEKTCTKIDYCAS 427
Query: 265 VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF-----------YNCIE-GEATEVK 408
+ G + E + C GF +PD C + C+ E+ +
Sbjct: 428 SNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHECVNMEESYYCR 487
Query: 409 CTAGLHFDEYSGTCVWPDSAGRQ--GCNEQQKKTKDGFEC 522
C G D TC D +Q GC + T+D F C
Sbjct: 488 CHRGYTLDPNGKTCSRVDHCAQQDHGCEQLCLNTEDSFVC 527
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 36.7 bits (81), Expect = 0.082
Identities = 33/146 (22%), Positives = 63/146 (43%)
Frame = +2
Query: 98 APNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 277
+P+SS+ ++S ++ N++SSS+ S PSS+ + S+ S
Sbjct: 91 SPSSSSSSSSSSSPSSSNSSSSSS----SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSS 146
Query: 278 IGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASG 457
+SS PS + + ++ S P + ++ S+ + +S+S+P P S
Sbjct: 147 PSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSS 206
Query: 458 PIPPEDKDVTNNKKKQRTASSAPKSS 535
P T++ +SS+P SS
Sbjct: 207 S-PSSSSSSTSSPSTSSPSSSSPSSS 231
Score = 32.3 bits (70), Expect = 1.8
Identities = 31/157 (19%), Positives = 65/157 (41%)
Frame = +2
Query: 86 LQLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXX 265
L P+SS+ ++S ++ +++SS + S S PSS+ + + S
Sbjct: 51 LSSSIPSSSS---SSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSS 107
Query: 266 XXXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPV 445
+SSP S + + ++ S ++SS+++ + +S+S+
Sbjct: 108 NSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSS 167
Query: 446 PASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKDR 556
P+S +++ ++SS+P SS P R
Sbjct: 168 PSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPR 204
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 35.5 bits (78), Expect = 0.19
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 5/153 (3%)
Frame = +2
Query: 101 PNSSAPLKT-ASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 277
P ++ P K S TT ATSS S SP+ ++ VL ST + +
Sbjct: 55 PGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTST--ATKSTATSVTPIPSST 112
Query: 278 IGLNSSPPSPTHNVPAAMDSL-PIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 454
+G + P T A M ++ P TP T+ T+ + TST + P +
Sbjct: 113 LGTTGTLPEQTTTPVATMSTIHPSSTP--ETTHTSTVLTTKATTTRATSSTSTPSSTPGT 170
Query: 455 GPIPPE---DKDVTNNKKKQRTASSAPKSSWLM 544
I E T T SS P ++W++
Sbjct: 171 TWILTELTTAATTTAGTGPTATPSSTPGTTWIL 203
>AY911311-1|AAX81434.1| 315|Homo sapiens chitinase family protein
V2 protein.
Length = 315
Score = 35.1 bits (77), Expect = 0.25
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P S N F++C+ G + C AGL FD C W
Sbjct: 272 RANGLY--PVASNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 314
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.33
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 5/153 (3%)
Frame = +2
Query: 101 PNSSAPLKT-ASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 277
P ++ P K S TT ATSS S SP+ ++ VL ST + +
Sbjct: 364 PGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTST--ATKSTATSVTPIPSST 421
Query: 278 IGLNSSPPSPTHNVPAAMDSL-PIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 454
+G + P T A M ++ P TP T+ T+ + TST + P +
Sbjct: 422 LGTTGTLPEQTTTPVATMSTIHPSSTP--ETTHTSTVLTTEATTTRATSSTSTPSSTPGT 479
Query: 455 GPIPPE-DKDVTNNKKKQRTA--SSAPKSSWLM 544
I E T TA SS P ++W++
Sbjct: 480 TCILTELTTAATTTAATGPTAMPSSTPGTTWIL 512
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 34.3 bits (75), Expect = 0.44
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 5/153 (3%)
Frame = +2
Query: 101 PNSSAPLKT-ASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 277
P ++ P K S TT ATSS S SP+ ++ VL +T + +
Sbjct: 104 PGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTTT--ATKSTATSVTPIPSST 161
Query: 278 IGLNSSPPSPTHNVPAAMDSL-PIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 454
+G + P T A M ++ P TP T+ T+ + TST + P +
Sbjct: 162 LGTTGTLPEQTTTPVATMSTIHPSSTP--ETTHTSTVLTTKATTTRATSSTSTPSSTPGT 219
Query: 455 GPIPPE---DKDVTNNKKKQRTASSAPKSSWLM 544
I E T T SS P ++W++
Sbjct: 220 TWILTELTTAATTTAGTGPTATPSSTPGTTWIL 252
>BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 364 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 406
>BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 364 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 406
>BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 325 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 367
>BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 325 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 367
>BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 325 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 367
>AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protein
V1 protein.
Length = 315
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 272 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 314
>AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protein 3
protein.
Length = 430
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 387 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 429
>AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protein 2
protein.
Length = 315
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 272 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 314
>AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protein 1
protein.
Length = 368
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 325 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 367
>AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 362 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 404
>AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 433 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 475
>AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 377 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 419
>AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 362 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 404
>AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 433 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 475
>AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 377 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 419
>AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitinase
precursor protein.
Length = 476
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 433 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 475
>AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitinase
family protein.
Length = 315
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 272 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 314
>AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitinase
family protein.
Length = 368
Score = 33.9 bits (74), Expect = 0.58
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 322 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
R NG + P + N F++C+ G + C AGL FD C W
Sbjct: 325 RANGLY--PVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNW 367
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 33.5 bits (73), Expect = 0.76
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 7/155 (4%)
Frame = +2
Query: 101 PNSSAPLKT-ASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 277
P ++ P K S TT ATSS S SP+ ++ VL ST + +
Sbjct: 2890 PGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTST--ATKSTATSVTPIPSST 2947
Query: 278 IGLNSSPPSPTHNVPAAMDSL-PIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTP--VP 448
+G + P T A M ++ P TP TT A +STSTP P
Sbjct: 2948 LGTTGTLPEQTTTPVATMSTIHPSSTP-----ETTHTSTVLTTKATTRATSSTSTPSSTP 3002
Query: 449 ASGPIPPE---DKDVTNNKKKQRTASSAPKSSWLM 544
+ I E T T SS P ++W++
Sbjct: 3003 GTTWILTELTTAATTTAGTGPTATPSSTPGTTWIL 3037
Score = 32.3 bits (70), Expect = 1.8
Identities = 35/149 (23%), Positives = 48/149 (32%), Gaps = 1/149 (0%)
Frame = +2
Query: 101 PNSSAPLKT-ASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXX 277
P ++ P K S TT ATSS S SP+ ++ VL ST
Sbjct: 1663 PGTAPPPKVLTSQATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLG 1722
Query: 278 IGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASG 457
+S P H + P TP +ST T +STP
Sbjct: 1723 T-TGTSQNRPPHPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWI 1781
Query: 458 PIPPEDKDVTNNKKKQRTASSAPKSSWLM 544
T T SS P ++W++
Sbjct: 1782 LTELTTAATTTAALPHGTPSSTPGTTWIL 1810
>BC117190-1|AAI17191.1| 1529|Homo sapiens slit homolog 2 (Drosophila)
protein.
Length = 1529
Score = 33.5 bits (73), Expect = 0.76
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +1
Query: 139 DDRQCDKFFECVDGVAT-TKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQ 315
+D C+ CVDG+ T LCP + K++ C Q N D + PK +
Sbjct: 1003 EDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPK-GFK 1061
Query: 316 CPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLH-FDEYSG-TCVWPD 462
C G+ C+I ++ + + KC G H D +G TC+ P+
Sbjct: 1062 CDCTPGYVGEH----CDIDFD----DCQDNKCKNGAHCTDAVNGYTCICPE 1104
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 33.5 bits (73), Expect = 0.76
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPED 475
PPS + +VPA+ S P+P L ++T+ A STS PVPAS P+ P
Sbjct: 1755 PPSTSASVPAST-SAPLPATLTPVPASTSAPVPASTLAPVLA--STSAPVPAS-PLAPVS 1810
Query: 476 KDVTNNKKKQRTASSAPKSSWLMP 547
+ + + S+A +S P
Sbjct: 1811 ASASVSASVPASTSAAAITSSSAP 1834
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 33.5 bits (73), Expect = 0.76
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPED 475
PPS + +VPA+ S P+P L ++T+ A STS PVPAS P+ P
Sbjct: 1755 PPSTSASVPAST-SAPLPATLTPVPASTSAPVPASTLAPVLA--STSAPVPAS-PLAPVS 1810
Query: 476 KDVTNNKKKQRTASSAPKSSWLMP 547
+ + + S+A +S P
Sbjct: 1811 ASASVSASVPASTSAAAITSSSAP 1834
>AF133270-1|AAD25539.1| 1525|Homo sapiens SLIT2 protein.
Length = 1525
Score = 33.5 bits (73), Expect = 0.76
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +1
Query: 139 DDRQCDKFFECVDGVAT-TKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQ 315
+D C+ CVDG+ T LCP + K++ C Q N D + PK +
Sbjct: 999 EDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPK-GFK 1057
Query: 316 CPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLH-FDEYSG-TCVWPD 462
C G+ C+I ++ + + KC G H D +G TC+ P+
Sbjct: 1058 CDCTPGYVGEH----CDIDFD----DCQDNKCKNGAHCTDAVNGYTCICPE 1100
>AF055585-1|AAD04309.1| 1521|Homo sapiens neurogenic extracellular
slit protein Slit2 protein.
Length = 1521
Score = 33.5 bits (73), Expect = 0.76
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +1
Query: 139 DDRQCDKFFECVDGVAT-TKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQ 315
+D C+ CVDG+ T LCP + K++ C Q N D + PK +
Sbjct: 995 EDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPK-GFK 1053
Query: 316 CPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLH-FDEYSG-TCVWPD 462
C G+ C+I ++ + + KC G H D +G TC+ P+
Sbjct: 1054 CDCTPGYVGEH----CDIDFD----DCQDNKCKNGAHCTDAVNGYTCICPE 1096
>AB017168-1|BAA35185.1| 1529|Homo sapiens Slit-2 protein protein.
Length = 1529
Score = 33.5 bits (73), Expect = 0.76
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +1
Query: 139 DDRQCDKFFECVDGVAT-TKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQ 315
+D C+ CVDG+ T LCP + K++ C Q N D + PK +
Sbjct: 1003 EDNDCENNSTCVDGINNYTCLCPPEYTGELCEEKLDFCAQDLNPCQHDSKCILTPK-GFK 1061
Query: 316 CPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLH-FDEYSG-TCVWPD 462
C G+ C+I ++ + + KC G H D +G TC+ P+
Sbjct: 1062 CDCTPGYVGEH----CDIDFD----DCQDNKCKNGAHCTDAVNGYTCICPE 1104
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 33.1 bits (72), Expect = 1.0
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 293 SPPSPTHNVP--AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T P S P+ TP+ +STT T+T+TP P + P P
Sbjct: 860 SPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPT---TTTTTPPPTTTPSP 916
Query: 467 PEDKDVT 487
P +T
Sbjct: 917 PTTTPIT 923
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 293 SPPSPTHNVP--AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T P S P TP+ +STT T+T+TP P + P P
Sbjct: 978 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP---TTTTTPPPTTTPSP 1034
Query: 467 P 469
P
Sbjct: 1035 P 1035
Score = 29.9 bits (64), Expect = 9.4
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 293 SPPSPTHNVPAAMDSL--PIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T + P + P TP T++TT T+T+TP+P + P P
Sbjct: 775 SPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPP---ITTTTTPLPTTTPSP 831
Query: 467 P 469
P
Sbjct: 832 P 832
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 33.1 bits (72), Expect = 1.0
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 293 SPPSPTHNVP--AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T P S P+ TP+ +STT T+T+TP P + P P
Sbjct: 1485 SPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPT---TTTTTPPPTTTPSP 1541
Query: 467 PEDKDVT 487
P +T
Sbjct: 1542 PTTTPIT 1548
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 293 SPPSPTHNVP--AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T P S P TP+ +STT T+T+TP P + P P
Sbjct: 1603 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP---TTTTTPPPTTTPSP 1659
Query: 467 P 469
P
Sbjct: 1660 P 1660
Score = 29.9 bits (64), Expect = 9.4
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 293 SPPSPTHNVPAAMDSL--PIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T + P + P TP T++TT T+T+TP+P + P P
Sbjct: 1400 SPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPP---ITTTTTPLPTTTPSP 1456
Query: 467 P 469
P
Sbjct: 1457 P 1457
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.0
Identities = 34/157 (21%), Positives = 65/157 (41%)
Frame = +2
Query: 86 LQLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXX 265
L P+SS+ + S + ++ SSS+ S SP SS+ + S+ S
Sbjct: 51 LSSSIPSSSSSSSSPSSSHSSSSPSSSH-SSSSPSSSSSTSSPSSSSSSSSSSPSSSNSS 109
Query: 266 XXXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPV 445
SS S + + P++ S P + ++SS+++ + +S+S+
Sbjct: 110 SSSSSSSPSSSSSSSSSSPSSSSSSPSSS---SSSSSSSPSSSSSSPSSSSSSSSSSSSS 166
Query: 446 PASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKDR 556
P+S +++ ++SS+P SS P R
Sbjct: 167 PSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPR 203
Score = 33.1 bits (72), Expect = 1.0
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Frame = +2
Query: 104 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIG 283
+SS+P ++S ++ +++SSS+ S S PSS+ + S+ S
Sbjct: 124 SSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSS--SSSSSSSSPSSSSPSSSGSSPSS 181
Query: 284 LNSSPPSPTHNVPAAMDSLPIP---TPLCATSSTTA 382
NSSP S + + P++ S P P +P ++SST++
Sbjct: 182 SNSSPSSSSSS-PSSSSSSPSPRSSSPSSSSSSTSS 216
Score = 32.7 bits (71), Expect = 1.3
Identities = 29/144 (20%), Positives = 62/144 (43%)
Frame = +2
Query: 104 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXIG 283
++S+P ++S ++ ++S+S+ S S PSS+ + S+ S
Sbjct: 88 STSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPS 147
Query: 284 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 463
+SS PS + + ++ S P ++SS ++ + +S+S +S P
Sbjct: 148 SSSSSPSSSSSSSSSSSSSP------SSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPS 201
Query: 464 PPEDKDVTNNKKKQRTASSAPKSS 535
P +++ ++S+P SS
Sbjct: 202 PRSSSPSSSSSSTSSPSTSSPSSS 225
>BC103695-1|AAI03696.1| 466|Homo sapiens chitinase 1
(chitotriosidase) protein.
Length = 466
Score = 33.1 bits (72), Expect = 1.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 112 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 219
C K DG Y + R+ F+ C G + CP GLVF
Sbjct: 420 CQGKADGLYPNPRERSSFYSCAGGRLFQQSCPTGLVF 456
Score = 31.5 bits (68), Expect = 3.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 343 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
+P+P + FY+C G + C GL F C W
Sbjct: 428 YPNPRERSSFYSCAGGRLFQQSCPTGLVFSNSCKCCTW 465
>BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein.
Length = 377
Score = 33.1 bits (72), Expect = 1.0
Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 1/146 (0%)
Frame = +2
Query: 101 PNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRXXXXXXXXXXXXXI 280
P+SSAP +T + T +AT+ + S +P ++A
Sbjct: 180 PSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPP 239
Query: 281 GLNSSPPSP-THNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASG 457
+++ P+P + + P ++P PTP AT+ + S +TP P S
Sbjct: 240 TPSATTPAPLSSSAPPETTAVP-PTP-SATTLDPSSASAPPETTAAPPTPSATTPAPPSS 297
Query: 458 PIPPEDKDVTNNKKKQRTASSAPKSS 535
P P E + AP +S
Sbjct: 298 PAPQETTAAPITTPNSSPTTLAPDTS 323
Score = 30.3 bits (65), Expect = 7.1
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Frame = +2
Query: 101 PNSSAPLKTASMKTTDNATSSSNVSMESPQPSSA-RTVLCSTLLSGRXXXXXXXXXXXXX 277
P+SSAP +T + T +AT+ + +S +P ++A +T L
Sbjct: 226 PSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 278 IGLNSSPPSPTHNVPAAMDSLPIPTPLCA-------TSSTTAXXXXXXXXXXXXAFTSTS 436
++P P+ P + PI TP + TS T+A T+T
Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTITSVTTQTTTTK 345
Query: 437 TPVPASG 457
P A G
Sbjct: 346 QPTSAPG 352
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 33.1 bits (72), Expect = 1.0
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Frame = +2
Query: 104 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLS-----GRXXXXXXXXXX 268
++S P+ T S + + + T++ SM PS T L S L+S
Sbjct: 2718 DTSTPV-TTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAV 2776
Query: 269 XXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 448
I + +S + + A + S+P TP ++ T+ A T ++TPV
Sbjct: 2777 DTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPVASSEAGTLSTTPVD 2836
Query: 449 ASGPIPPEDK 478
S P+ K
Sbjct: 2837 TSTPVTTSTK 2846
Score = 31.1 bits (67), Expect = 4.1
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 5/125 (4%)
Frame = +2
Query: 104 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCS-----TLLSGRXXXXXXXXXX 268
++S P+ T S + + + T++ SM + PS T L S TLL+
Sbjct: 714 DTSTPV-TTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPL 772
Query: 269 XXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 448
+ +S + S+PI TP + T+ A T ++TPV
Sbjct: 773 DTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVD 832
Query: 449 ASGPI 463
++ P+
Sbjct: 833 SNSPV 837
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 33.1 bits (72), Expect = 1.0
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Frame = +2
Query: 104 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLS-----GRXXXXXXXXXX 268
++S P+ T S + + + T++ SM PS T L S L+S
Sbjct: 2718 DTSTPV-TTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAV 2776
Query: 269 XXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 448
I + +S + + A + S+P TP ++ T+ A T ++TPV
Sbjct: 2777 DTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPVASSEAGTLSTTPVD 2836
Query: 449 ASGPIPPEDK 478
S P+ K
Sbjct: 2837 TSTPVTTSTK 2846
Score = 31.1 bits (67), Expect = 4.1
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 5/125 (4%)
Frame = +2
Query: 104 NSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCS-----TLLSGRXXXXXXXXXX 268
++S P+ T S + + + T++ SM + PS T L S TLL+
Sbjct: 714 DTSTPV-TTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPL 772
Query: 269 XXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 448
+ +S + S+PI TP + T+ A T ++TPV
Sbjct: 773 DTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVD 832
Query: 449 ASGPI 463
++ P+
Sbjct: 833 SNSPV 837
>U29615-1|AAC50246.1| 466|Homo sapiens chitotriosidase precursor
protein.
Length = 466
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 112 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 219
C K DG Y + R+ F+ C G + CP GLVF
Sbjct: 420 CQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVF 456
Score = 31.9 bits (69), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 343 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
+P+P + FY+C G + C GL F C W
Sbjct: 428 YPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 465
>BC105682-1|AAI05683.1| 466|Homo sapiens chitinase 1
(chitotriosidase) protein.
Length = 466
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 112 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 219
C K DG Y + R+ F+ C G + CP GLVF
Sbjct: 420 CQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVF 456
Score = 31.9 bits (69), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 343 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
+P+P + FY+C G + C GL F C W
Sbjct: 428 YPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 465
>BC105681-1|AAI05682.1| 466|Homo sapiens chitinase 1
(chitotriosidase) protein.
Length = 466
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 112 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 219
C K DG Y + R+ F+ C G + CP GLVF
Sbjct: 420 CQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVF 456
Score = 31.9 bits (69), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 343 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
+P+P + FY+C G + C GL F C W
Sbjct: 428 YPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 465
>BC105680-1|AAI05681.1| 466|Homo sapiens chitinase 1
(chitotriosidase) protein.
Length = 466
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 112 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 219
C K DG Y + R+ F+ C G + CP GLVF
Sbjct: 420 CQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVF 456
Score = 31.9 bits (69), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 343 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
+P+P + FY+C G + C GL F C W
Sbjct: 428 YPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 465
>BC069614-1|AAH69614.1| 454|Homo sapiens CHIT1 protein protein.
Length = 454
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 112 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 219
C K DG Y + R+ F+ C G + CP GLVF
Sbjct: 408 CQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVF 444
Score = 31.9 bits (69), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 343 HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVW 456
+P+P + FY+C G + C GL F C W
Sbjct: 416 YPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 453
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 293 SPPSPTHNVP--AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T P S P TP+ +STT T+T+TP P + P P
Sbjct: 143 SPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPT---TTTTTPPPTTTPSP 199
Query: 467 PEDKDVT 487
P +T
Sbjct: 200 PTTTPIT 206
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPED 475
PP+ T + P + + P PT + +TT T+T+TP P + P PP
Sbjct: 107 PPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPT---TTTTTPPPTTTPSPPTT 163
Query: 476 KDVT 487
+T
Sbjct: 164 TPIT 167
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 293 SPPSPTHNVP--AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
SPP+ T P S P TP+ +STT T+T+TP P + P P
Sbjct: 261 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP---TTTTTPPPTTTPSP 317
Query: 467 P 469
P
Sbjct: 318 P 318
>BC017066-1|AAH17066.1| 444|Homo sapiens proline-rich coiled-coil 1
protein.
Length = 444
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 15 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 70
>AL831963-1|CAD38605.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AK057437-1|BAB71487.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ32875 fis, clone TESTI2004031. ).
Length = 445
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AJ515429-1|CAD56439.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AJ515428-1|CAD56438.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AJ515158-1|CAD56470.1| 464|Homo sapiens hypothetical protein
protein.
Length = 464
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AJ496322-1|CAD42881.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AJ441110-1|CAD29585.2| 462|Homo sapiens hypothetical protein
protein.
Length = 462
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AJ427339-1|CAD22113.1| 445|Homo sapiens hypothetical protein
protein.
Length = 445
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 296 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPP 469
PP+P AM S P+P L ATSS ++ A+++ P+P P P
Sbjct: 16 PPNPAGLAATAMSSTPVP--LAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPSAP 71
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 31.1 bits (67), Expect = 4.1
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +2
Query: 290 SSPPSPTHNVPAAMD-SLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 466
S+PP+ VPAA S+P PTP A + A T S PA P P
Sbjct: 9 SAPPATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAPGQTPASAQAPAQTPAP 68
>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 30.7 bits (66), Expect = 5.4
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Frame = +1
Query: 244 KCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTA-G 420
+CD+P + CG+ + P CP +G C Y G A + +C G
Sbjct: 143 QCDKPCS--CGNNSSCDPKSGVCSCP--SGLQPPNCLQPCTPGYY---GPACQFRCQCHG 195
Query: 421 LHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECP 525
D +G C P C+ + GF CP
Sbjct: 196 APCDPQTGACFCPAERTGPSCDVSCSQGTSGFFCP 230
>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 30.7 bits (66), Expect = 5.4
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Frame = +1
Query: 244 KCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTA-G 420
+CD+P + CG+ + P CP +G C Y G A + +C G
Sbjct: 143 QCDKPCS--CGNNSSCDPKSGVCSCP--SGLQPPNCLQPCTPGYY---GPACQFRCQCHG 195
Query: 421 LHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECP 525
D +G C P C+ + GF CP
Sbjct: 196 APCDPQTGACFCPAERTGPSCDVSCSQGTSGFFCP 230
>AK075489-1|BAC11648.1| 451|Homo sapiens rase 7. protein.
Length = 451
Score = 30.7 bits (66), Expect = 5.4
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Frame = +1
Query: 88 AIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKL-CPDGLVFDPTIRKINKCDQPFN 264
A+A +C A D ++ C+ ECV+ + C +G +P + K D +
Sbjct: 310 ALAEDGKRCVAVDYCASENHGCEH--ECVNADGSYLCQCHEGFALNPDKKTCTKIDYCAS 367
Query: 265 VDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVC-NIFYNCIEGEATEVKC 411
+ G + E + C GF +PD C I Y + E +C
Sbjct: 368 SNHGCQHECVNTDDSYSCHCLKGFTLNPDKKTCRRINYCALNKPGCEHEC 417
>D28476-1|BAA05837.2| 2005|Homo sapiens KIAA0045 protein.
Length = 2005
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 464 PPEDKDVTNNKKKQRTASSAPKSSWL 541
PP D D +N+ K T + +PKSS+L
Sbjct: 1030 PPRDDDKVDNQAKSPTTTQSPKSSFL 1055
>BC114556-1|AAI14557.1| 2040|Homo sapiens TRIP12 protein protein.
Length = 2040
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 464 PPEDKDVTNNKKKQRTASSAPKSSWL 541
PP D D +N+ K T + +PKSS+L
Sbjct: 1065 PPRDDDKVDNQAKSPTTTQSPKSSFL 1090
>BC113891-1|AAI13892.1| 1722|Homo sapiens TRIP12 protein protein.
Length = 1722
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 464 PPEDKDVTNNKKKQRTASSAPKSSWL 541
PP D D +N+ K T + +PKSS+L
Sbjct: 747 PPRDDDKVDNQAKSPTTTQSPKSSFL 772
>AC093384-2|AAY14681.1| 1299|Homo sapiens unknown protein.
Length = 1299
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 464 PPEDKDVTNNKKKQRTASSAPKSSWL 541
PP D D +N+ K T + +PKSS+L
Sbjct: 324 PPRDDDKVDNQAKSPTTTQSPKSSFL 349
>L00352-1|AAA56833.1| 860|Homo sapiens low density lipoprotein
receptor protein.
Length = 860
Score = 29.9 bits (64), Expect = 9.4
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +1
Query: 79 AVAAIASAQFKCPAKDGQ-YEDDRQCDKFFECVD-----GVATTKLCPDGLVFDPTIRKI 240
AVA +F+C DG RQCD+ ++C D G LC F +
Sbjct: 232 AVATCRPDEFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGEC 289
Query: 241 NKCDQPFNV--DCGDRTELQPPKP--NSQCPRRNGFFAHPDPSVCN---IFYNCI 384
D+ N+ DC D ++ +P K ++C NG +H VCN I Y C+
Sbjct: 290 ITLDKVCNMARDCRDWSD-EPIKECGTNECLDNNGGCSH----VCNDLKIGYECL 339
>BT007361-1|AAP36025.1| 860|Homo sapiens low density lipoprotein
receptor (familial hypercholesterolemia) protein.
Length = 860
Score = 29.9 bits (64), Expect = 9.4
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +1
Query: 79 AVAAIASAQFKCPAKDGQ-YEDDRQCDKFFECVD-----GVATTKLCPDGLVFDPTIRKI 240
AVA +F+C DG RQCD+ ++C D G LC F +
Sbjct: 232 AVATCRPDEFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGEC 289
Query: 241 NKCDQPFNV--DCGDRTELQPPKP--NSQCPRRNGFFAHPDPSVCN---IFYNCI 384
D+ N+ DC D ++ +P K ++C NG +H VCN I Y C+
Sbjct: 290 ITLDKVCNMARDCRDWSD-EPIKECGTNECLDNNGGCSH----VCNDLKIGYECL 339
>BC014514-1|AAH14514.1| 860|Homo sapiens low density lipoprotein
receptor (familial hypercholesterolemia) protein.
Length = 860
Score = 29.9 bits (64), Expect = 9.4
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +1
Query: 79 AVAAIASAQFKCPAKDGQ-YEDDRQCDKFFECVD-----GVATTKLCPDGLVFDPTIRKI 240
AVA +F+C DG RQCD+ ++C D G LC F +
Sbjct: 232 AVATCRPDEFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGEC 289
Query: 241 NKCDQPFNV--DCGDRTELQPPKP--NSQCPRRNGFFAHPDPSVCN---IFYNCI 384
D+ N+ DC D ++ +P K ++C NG +H VCN I Y C+
Sbjct: 290 ITLDKVCNMARDCRDWSD-EPIKECGTNECLDNNGGCSH----VCNDLKIGYECL 339
>AY324609-1|AAP72971.1| 860|Homo sapiens low density lipoprotein
receptor protein.
Length = 860
Score = 29.9 bits (64), Expect = 9.4
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +1
Query: 79 AVAAIASAQFKCPAKDGQ-YEDDRQCDKFFECVD-----GVATTKLCPDGLVFDPTIRKI 240
AVA +F+C DG RQCD+ ++C D G LC F +
Sbjct: 232 AVATCRPDEFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGEC 289
Query: 241 NKCDQPFNV--DCGDRTELQPPKP--NSQCPRRNGFFAHPDPSVCN---IFYNCI 384
D+ N+ DC D ++ +P K ++C NG +H VCN I Y C+
Sbjct: 290 ITLDKVCNMARDCRDWSD-EPIKECGTNECLDNNGGCSH----VCNDLKIGYECL 339
>AY114155-1|AAM56036.1| 860|Homo sapiens low density lipoprotein
receptor protein.
Length = 860
Score = 29.9 bits (64), Expect = 9.4
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +1
Query: 79 AVAAIASAQFKCPAKDGQ-YEDDRQCDKFFECVD-----GVATTKLCPDGLVFDPTIRKI 240
AVA +F+C DG RQCD+ ++C D G LC F +
Sbjct: 232 AVATCRPDEFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGEC 289
Query: 241 NKCDQPFNV--DCGDRTELQPPKP--NSQCPRRNGFFAHPDPSVCN---IFYNCI 384
D+ N+ DC D ++ +P K ++C NG +H VCN I Y C+
Sbjct: 290 ITLDKVCNMARDCRDWSD-EPIKECGTNECLDNNGGCSH----VCNDLKIGYECL 339
>AF217403-1|AAF24515.1| 837|Homo sapiens low density lipoprotein
receptor protein.
Length = 837
Score = 29.9 bits (64), Expect = 9.4
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +1
Query: 79 AVAAIASAQFKCPAKDGQ-YEDDRQCDKFFECVD-----GVATTKLCPDGLVFDPTIRKI 240
AVA +F+C DG RQCD+ ++C D G LC F +
Sbjct: 209 AVATCRPDEFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGEC 266
Query: 241 NKCDQPFNV--DCGDRTELQPPKP--NSQCPRRNGFFAHPDPSVCN---IFYNCI 384
D+ N+ DC D ++ +P K ++C NG +H VCN I Y C+
Sbjct: 267 ITLDKVCNMARDCRDWSD-EPIKECGTNECLDNNGGCSH----VCNDLKIGYECL 316
>AB209409-1|BAD92646.1| 870|Homo sapiens low density lipoprotein
receptor precursor variant protein.
Length = 870
Score = 29.9 bits (64), Expect = 9.4
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = +1
Query: 79 AVAAIASAQFKCPAKDGQ-YEDDRQCDKFFECVD-----GVATTKLCPDGLVFDPTIRKI 240
AVA +F+C DG RQCD+ ++C D G LC F +
Sbjct: 244 AVATCRPDEFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGEC 301
Query: 241 NKCDQPFNV--DCGDRTELQPPKP--NSQCPRRNGFFAHPDPSVCN---IFYNCI 384
D+ N+ DC D ++ +P K ++C NG +H VCN I Y C+
Sbjct: 302 ITLDKVCNMARDCRDWSD-EPIKECGTNECLDNNGGCSH----VCNDLKIGYECL 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,802,346
Number of Sequences: 237096
Number of extensions: 2728590
Number of successful extensions: 15047
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 13452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14926
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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