Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2370
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p pro...   297   8e-81
AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA...   297   8e-81
U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal prot...   289   2e-78
BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p pro...   213   2e-55
AE013599-2377|AAS64833.1|  827|Drosophila melanogaster CG33455-P...    28   8.9  

>AY094790-1|AAM11143.1|  184|Drosophila melanogaster LD17235p
           protein.
          Length = 184

 Score =  297 bits (729), Expect = 8e-81
 Identities = 142/179 (79%), Positives = 151/179 (84%)
 Frame = +3

Query: 30  SKXXPKDNSXNVMRNLHIRKLCLNICVGESGDRLTRAXXXLEXLTGQXPVFSKARYTVRP 209
           +K   +D + N MR+LHIRKLCLNICVGESGDRLTRA   LE LTGQ PVFSKARYTVR 
Sbjct: 5   TKKIKRDPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 64

Query: 210 FGIRRXEXIAXHCTXRGAKAEEILERGLKVREYELRRDNFSATGNXGFXIQEHIDXGIKY 389
           FGIRR E IA HCT RGAKAEEILERGLKVREYELRR+NFS+TGN GF IQEHID GIKY
Sbjct: 65  FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKY 124

Query: 390 DPXIGIYGLDFYVXLGRPGFNVAHRKRKTGKVGXPHRLTXEDAXKRFQQKYDGIILNSK 566
           DP IGIYGLDFYV LGRPG+NV HRKRK+G VG  HRLT EDA K FQQKYDGIILN+K
Sbjct: 125 DPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNTK 183


>AE013599-2887|AAF57560.1|  184|Drosophila melanogaster CG7726-PA
           protein.
          Length = 184

 Score =  297 bits (729), Expect = 8e-81
 Identities = 142/179 (79%), Positives = 151/179 (84%)
 Frame = +3

Query: 30  SKXXPKDNSXNVMRNLHIRKLCLNICVGESGDRLTRAXXXLEXLTGQXPVFSKARYTVRP 209
           +K   +D + N MR+LHIRKLCLNICVGESGDRLTRA   LE LTGQ PVFSKARYTVR 
Sbjct: 5   TKKIKRDPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 64

Query: 210 FGIRRXEXIAXHCTXRGAKAEEILERGLKVREYELRRDNFSATGNXGFXIQEHIDXGIKY 389
           FGIRR E IA HCT RGAKAEEILERGLKVREYELRR+NFS+TGN GF IQEHID GIKY
Sbjct: 65  FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKY 124

Query: 390 DPXIGIYGLDFYVXLGRPGFNVAHRKRKTGKVGXPHRLTXEDAXKRFQQKYDGIILNSK 566
           DP IGIYGLDFYV LGRPG+NV HRKRK+G VG  HRLT EDA K FQQKYDGIILN+K
Sbjct: 125 DPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNTK 183


>U15643-1|AAC46585.1|  184|Drosophila melanogaster ribosomal protein
           DL11 protein.
          Length = 184

 Score =  289 bits (710), Expect = 2e-78
 Identities = 139/179 (77%), Positives = 148/179 (82%)
 Frame = +3

Query: 30  SKXXPKDNSXNVMRNLHIRKLCLNICVGESGDRLTRAXXXLEXLTGQXPVFSKARYTVRP 209
           +K   +D +     +LHIRKLCLNICVGESGDRLTRA   LE LTGQ PVFSKARYTVR 
Sbjct: 5   TKKIKRDPAQEPDEDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRS 64

Query: 210 FGIRRXEXIAXHCTXRGAKAEEILERGLKVREYELRRDNFSATGNXGFXIQEHIDXGIKY 389
           FGIRR E IA HCT RGAKAEEILERGLKVREYELRR+NFS+TGN GF IQEHID GIKY
Sbjct: 65  FGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKY 124

Query: 390 DPXIGIYGLDFYVXLGRPGFNVAHRKRKTGKVGXPHRLTXEDAXKRFQQKYDGIILNSK 566
           DP IGIYGLDFYV LGRPG+NV HRKRK+G VG  HRLT EDA K FQQKYDGIILN+K
Sbjct: 125 DPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILNTK 183


>BT022593-1|AAY55009.1|  163|Drosophila melanogaster IP06777p
           protein.
          Length = 163

 Score =  213 bits (520), Expect = 2e-55
 Identities = 101/125 (80%), Positives = 106/125 (84%)
 Frame = +3

Query: 192 RYTVRPFGIRRXEXIAXHCTXRGAKAEEILERGLKVREYELRRDNFSATGNXGFXIQEHI 371
           R  VR FGIRR E IA HCT RGAKAEEILERGLKVREYELRR+NFS+TGN GF IQEHI
Sbjct: 38  RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHI 97

Query: 372 DXGIKYDPXIGIYGLDFYVXLGRPGFNVAHRKRKTGKVGXPHRLTXEDAXKRFQQKYDGI 551
           D GIKYDP IGIYGLDFYV LGRPG+NV HRKRK+G VG  HRLT EDA K FQQKYDGI
Sbjct: 98  DLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGI 157

Query: 552 ILNSK 566
           ILN+K
Sbjct: 158 ILNTK 162


>AE013599-2377|AAS64833.1|  827|Drosophila melanogaster CG33455-PA
           protein.
          Length = 827

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 547 PSYFCWNLFXASSXVRRW 494
           PS+ CWNL  A   VR+W
Sbjct: 590 PSFNCWNLQEAVQLVRKW 607


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,936,674
Number of Sequences: 53049
Number of extensions: 377455
Number of successful extensions: 671
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)