Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2365
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78239-4|CAI79141.2| 301|Caenorhabditis elegans Hypothetical pr... 30 0.35
AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical ... 29 0.62
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 29 0.82
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 29 0.82
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 29 0.82
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 29 0.82
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 29 0.82
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 29 0.82
U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase ... 27 1.9
AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threon... 27 1.9
Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical pr... 27 3.3
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 27 3.3
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 27 3.3
U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical pr... 26 4.4
U37429-5|AAA79347.1| 311|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 26 5.8
AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical ... 26 5.8
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 26 5.8
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 25 7.6
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 25 7.6
AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical... 25 7.6
>Z78239-4|CAI79141.2| 301|Caenorhabditis elegans Hypothetical
protein C30G7.3 protein.
Length = 301
Score = 29.9 bits (64), Expect = 0.35
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 146 NPYYHFPPTSRCTVTNLSILECSRHRIPLTGTR 48
NPYY T+ T ++LSILE SR +I + R
Sbjct: 24 NPYYVCYGTTGSTTSSLSILEFSREQITVVSPR 56
>AF106579-6|ABS19465.1| 406|Caenorhabditis elegans Hypothetical
protein F54E2.4 protein.
Length = 406
Score = 29.1 bits (62), Expect = 0.62
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 294 APTPEPGALSPISQHALYTRPVAPALP 214
APTP PGA S ++ A PV P+ P
Sbjct: 110 APTPVPGAKSAVASPAPPQTPVGPSAP 136
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 28.7 bits (61), Expect = 0.82
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 300 QAAPTPEPGALSPISQHALYTRPVAPALPEP 208
QA PTP P A +P + A + P + P P
Sbjct: 81 QARPTPAPAAATPTASSAPSSNPTPSSQPNP 111
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 28.7 bits (61), Expect = 0.82
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 300 QAAPTPEPGALSPISQHALYTRPVAPALPEP 208
QA PTP P A +P + A + P + P P
Sbjct: 81 QARPTPAPAAATPTASSAPSSNPTPSSQPNP 111
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 28.7 bits (61), Expect = 0.82
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 300 QAAPTPEPGALSPISQHALYTRPVAPALPEP 208
QA PTP P A +P + A + P + P P
Sbjct: 81 QARPTPAPAAATPTASSAPSSNPTPSSQPNP 111
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 28.7 bits (61), Expect = 0.82
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 300 QAAPTPEPGALSPISQHALYTRPVAPALPEP 208
QA PTP P A +P + A + P + P P
Sbjct: 81 QARPTPAPAAATPTASSAPSSNPTPSSQPNP 111
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 28.7 bits (61), Expect = 0.82
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 300 QAAPTPEPGALSPISQHALYTRPVAPALPEP 208
QA PTP P A +P + A + P + P P
Sbjct: 81 QARPTPAPAAATPTASSAPSSNPTPSSQPNP 111
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 28.7 bits (61), Expect = 0.82
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 290 RLPSRARSH--RSLSMRSTRVLSLRHYRSHPTRY*HPIHEPNSTTFH 156
R+P RA R S T +L H +SH Y P H+ ++T+ H
Sbjct: 113 RVPVRAAPEPPREQSWSQTEYATLAHNQSHEALYEDPRHQVHATSSH 159
>U40416-1|AAA81410.2| 822|Caenorhabditis elegans Protein kinase
protein 29 protein.
Length = 822
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 141 RIVRSVKSGTVRFVYWVLISC 203
++ RSV SG V+ YWV + C
Sbjct: 220 KLKRSVLSGLVKIPYWVSVEC 240
>AF403714-1|AAK97497.1| 822|Caenorhabditis elegans serine/threonine
kinase KIN-29 protein.
Length = 822
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 141 RIVRSVKSGTVRFVYWVLISC 203
++ RSV SG V+ YWV + C
Sbjct: 220 KLKRSVLSGLVKIPYWVSVEC 240
>Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical
protein F13G11.1b protein.
Length = 470
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 300 QAAPTPEPGALSPISQHALYTRPV 229
+A PT PG+ P Q L+T PV
Sbjct: 447 KALPTVLPGSFQPFLQPTLFTNPV 470
>Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical
protein F13G11.1a protein.
Length = 510
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 300 QAAPTPEPGALSPISQHALYTRPV 229
+A PT PG+ P Q L+T PV
Sbjct: 487 KALPTVLPGSFQPFLQPTLFTNPV 510
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 188 PIHEPNS-TTFH*SYNPYYHFPPTSRCTVTNLSILECSRH 72
P+ N+ TT + S+N ++ FP CT L IL S +
Sbjct: 714 PVTSSNTLTTINLSFNKFHTFPFCLACTCPRLLILNMSNN 753
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 188 PIHEPNS-TTFH*SYNPYYHFPPTSRCTVTNLSILECSRH 72
P+ N+ TT + S+N ++ FP CT L IL S +
Sbjct: 712 PVTSSNTLTTINLSFNKFHTFPFCLACTCPRLLILNMSNN 751
>U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical
protein M01H9.2 protein.
Length = 439
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 291 PTPEPGALSPISQHALYT-RPVAPALPEP 208
P PEP + PIS ++ Y+ PV P + +P
Sbjct: 180 PEPEPMRIEPISVYSPYSFVPVQPQVSQP 208
>U37429-5|AAA79347.1| 311|Caenorhabditis elegans Hypothetical
protein F09E5.7 protein.
Length = 311
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 281 SRARSHRSLSMRSTRVLSLRHYRSHPTRY*HPIHEPNSTTFH*SYNPYYH 132
SR + R+ +R+ L + R HP R HP+H+P F YY+
Sbjct: 195 SRTTARRNEPVRNENPLMIGGPR-HPPR--HPVHDPYGNRFPDPDTEYYN 241
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -1
Query: 291 PTPEPGALSPISQHALYTRPVAPALPEPP 205
P P P P H +T P ++P PP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPP 797
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -1
Query: 291 PTPEPGALSPISQHALYTRPVAPALPEPP 205
P P P P H +T P ++P PP
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPP 797
>AL132853-3|CAB60438.1| 859|Caenorhabditis elegans Hypothetical
protein Y80D3A.7 protein.
Length = 859
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 208 TLHDISTQYTNLTVPLFTDRTIRIITFLQQVD 113
+++ I+T T+LT+ D+ RI+ F + D
Sbjct: 437 SVYGIATMETDLTIQKMADQNARIVKFKRDAD 468
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 285 PEPGALSPISQHALYTRPVAPALPEPPYTILAPNTR 178
P P A P +Q A+ + P P + PP AP+ R
Sbjct: 83 PAPFAAQP-AQFAVQSAPPQPIVAPPPQAYAAPHKR 117
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 293 PRLPSRARSHRSLSMRSTRVLSLRHYRSHPTRY*HP 186
P+L + H S R+LSLR R+ P +Y P
Sbjct: 457 PQLQMQTSHHAYHGTASPRLLSLRATRASPGKYIQP 492
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 293 PRLPSRARSHRSLSMRSTRVLSLRHYRSHPTRY*HP 186
P+L + H S R+LSLR R+ P +Y P
Sbjct: 457 PQLQMQTSHHAYHGTASPRLLSLRATRASPGKYIQP 492
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 293 PRLPSRARSHRSLSMRSTRVLSLRHYRSHPTRY*HP 186
P+L + H S R+LSLR R+ P +Y P
Sbjct: 457 PQLQMQTSHHAYHGTASPRLLSLRATRASPGKYIQP 492
>AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical
protein Y71H2AM.3 protein.
Length = 483
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 214 GATLHDISTQYTNLTVPLFTDRTIRI 137
GATL D++ + + L P F D + RI
Sbjct: 132 GATLRDVTIKASTLCSPTFADNSGRI 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,965,210
Number of Sequences: 27780
Number of extensions: 134698
Number of successful extensions: 451
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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