Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2363
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 118 4e-27
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 118 4e-27
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 118 4e-27
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 41 6e-04
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 40 0.002
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 40 0.002
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 37 0.010
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 37 0.010
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 35 0.039
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 35 0.039
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 35 0.039
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 32 0.27
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 32 0.27
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 30 1.1
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 30 1.1
Z54271-3|CAA91039.1| 713|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z71177-7|CAI46554.1| 351|Caenorhabditis elegans Hypothetical pr... 27 7.7
U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yea... 27 7.7
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 118 bits (283), Expect = 4e-27
Identities = 54/95 (56%), Positives = 71/95 (74%)
Frame = +1
Query: 214 RENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXLIKVEGKVGXRMED 393
RE L++ A T+LGSK+V + R AEI E++DVNF +IK+EGKVG R+ED
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLED 220
Query: 394 SVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
++LV+G+V+DKTMSHPQ PK L+N K+AILTCPFE
Sbjct: 221 TILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFE 255
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 83 QASNLLDKGIHPIRIADGYDYGCR 154
+A L+D+GIHPI+IADG+D C+
Sbjct: 120 EAEKLIDRGIHPIKIADGFDLACK 143
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 118 bits (283), Expect = 4e-27
Identities = 54/95 (56%), Positives = 71/95 (74%)
Frame = +1
Query: 214 RENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXLIKVEGKVGXRMED 393
RE L++ A T+LGSK+V + R AEI E++DVNF +IK+EGKVG R+ED
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLED 220
Query: 394 SVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
++LV+G+V+DKTMSHPQ PK L+N K+AILTCPFE
Sbjct: 221 TILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFE 255
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 83 QASNLLDKGIHPIRIADGYDYGCR 154
+A L+D+GIHPI+IADG+D C+
Sbjct: 120 EAEKLIDRGIHPIKIADGFDLACK 143
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 118 bits (283), Expect = 4e-27
Identities = 54/95 (56%), Positives = 71/95 (74%)
Frame = +1
Query: 214 RENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXLIKVEGKVGXRMED 393
RE L++ A T+LGSK+V + R AEI E++DVNF +IK+EGKVG R+ED
Sbjct: 161 RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRLED 220
Query: 394 SVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
++LV+G+V+DKTMSHPQ PK L+N K+AILTCPFE
Sbjct: 221 TILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFE 255
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2
Query: 83 QASNLLDKGIHPIRIADGYDYGCR 154
+A L+D+GIHPI+IADG+D C+
Sbjct: 120 EAEKLIDRGIHPIKIADGFDLACK 143
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 85.0 bits (201), Expect = 4e-17
Identities = 35/49 (71%), Positives = 45/49 (91%)
Frame = +1
Query: 352 LIKVEGKVGXRMEDSVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
+IK+EGKVG R+ED++LV+G+V+DKTMSHPQ PK L+N K+AILTCPFE
Sbjct: 1 MIKMEGKVGGRLEDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFE 49
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Frame = +1
Query: 187 KLSQSTSXTRE-NLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXET--RDVNFX-L 354
K S++ T + + K + LG+K++ K L I + R+++
Sbjct: 142 KFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIRVEKAGVREIDIKRY 201
Query: 355 IKVEGKVGXRMEDSVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
++E G R+EDS +V+G+VV+K + H + + + N ++ +L C E
Sbjct: 202 CRIEKIPGGRIEDSQVVKGIVVNKDILHAKMRRRIENPRIVLLDCNLE 249
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 223 LIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXET-RDVNFXLIKVEGKVGXRMEDSV 399
L K A T+L SKVV + L+A + E +VN +IK+ K+G +E+S
Sbjct: 162 LNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGDTVEESE 221
Query: 400 LVRGVVVDKTMSHPQXPKVLRNVKLAIL 483
L+ G ++D+ P + K+ ++
Sbjct: 222 LIEGALIDQKTMGRGAPTRIEKAKIGLI 249
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 223 LIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXET-RDVNFXLIKVEGKVGXRMEDSV 399
L K A T+L SKVV + L+A + E +VN +IK+ K+G +E+S
Sbjct: 162 LNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKMGDTVEESE 221
Query: 400 LVRGVVVDKTMSHPQXPKVLRNVKLAIL 483
L+ G ++D+ P + K+ ++
Sbjct: 222 LIEGALIDQKTMGRGAPTRIEKAKIGLI 249
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 37.1 bits (82), Expect = 0.010
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Frame = +1
Query: 184 VKLSQSTSXTRENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXL--I 357
+K++ T RE L+K A TTL SK+V + A + T D + L I
Sbjct: 141 IKINGETEL-REMLVKCAATTLSSKLVSQERLFFANM------IVDAVNTLDAHLPLNMI 193
Query: 358 KVEGKVGXRMEDSVLVRGVVVDKTMSH---PQXPKVLRNVKLAILTCPFE 498
++ G + +S L++GV K S+ PK NVK+A+L E
Sbjct: 194 GIKKVNGGNLHESRLIKGVAFQKAFSYAGFEMQPKKYSNVKVALLNIELE 243
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 37.1 bits (82), Expect = 0.010
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Frame = +1
Query: 184 VKLSQSTSXTRENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXL--I 357
+K++ T RE L+K A TTL SK+V + A + T D + L I
Sbjct: 141 IKINGETEL-REMLVKCAATTLSSKLVSQERLFFANM------IVDAVNTLDAHLPLNMI 193
Query: 358 KVEGKVGXRMEDSVLVRGVVVDKTMSH---PQXPKVLRNVKLAILTCPFE 498
++ G + +S L++GV K S+ PK NVK+A+L E
Sbjct: 194 GIKKVNGGNLHESRLIKGVAFQKAFSYAGFEMQPKKYSNVKVALLNIELE 243
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 35.1 bits (77), Expect = 0.039
Identities = 26/101 (25%), Positives = 46/101 (45%)
Frame = +1
Query: 196 QSTSXTRENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXLIKVEGKV 375
+S R++L+K A TTLGSK++ + A++ N I++ K+
Sbjct: 144 ESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKG----SGNLDAIQIIKKL 199
Query: 376 GXRMEDSVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
G M +S L G +++K Q P+ + K+ I P +
Sbjct: 200 GGSMNESYLDEGFLLEKLPGMFQ-PRRVEKAKILIANTPMD 239
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 35.1 bits (77), Expect = 0.039
Identities = 26/101 (25%), Positives = 46/101 (45%)
Frame = +1
Query: 196 QSTSXTRENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXLIKVEGKV 375
+S R++L+K A TTLGSK++ + A++ N I++ K+
Sbjct: 144 ESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKG----SGNLDAIQIIKKL 199
Query: 376 GXRMEDSVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
G M +S L G +++K Q P+ + K+ I P +
Sbjct: 200 GGSMNESYLDEGFLLEKLPGMFQ-PRRVEKAKILIANTPMD 239
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 35.1 bits (77), Expect = 0.039
Identities = 26/101 (25%), Positives = 46/101 (45%)
Frame = +1
Query: 196 QSTSXTRENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXLIKVEGKV 375
+S R++L+K A TTLGSK++ + A++ N I++ K+
Sbjct: 144 ESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLKG----SGNLDAIQIIKKL 199
Query: 376 GXRMEDSVLVRGVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
G M +S L G +++K Q P+ + K+ I P +
Sbjct: 200 GGSMNESYLDEGFLLEKLPGMFQ-PRRVEKAKILIANTPMD 239
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +1
Query: 199 STSXTRENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXL--IKVEGK 372
S S R++++ A T++ SK++ E+ V + + + V
Sbjct: 144 SDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKA 203
Query: 373 VGXRMEDSVLVRGVVVDKTMSHPQXPKVLRNVKLAIL 483
G +SVLV+G ++ T++ P ++N K+A L
Sbjct: 204 HGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACL 240
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +1
Query: 199 STSXTRENLIKXAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVNFXL--IKVEGK 372
S S R++++ A T++ SK++ E+ V + + + V
Sbjct: 144 SDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLKA 203
Query: 373 VGXRMEDSVLVRGVVVDKTMSHPQXPKVLRNVKLAIL 483
G +SVLV+G ++ T++ P ++N K+A L
Sbjct: 204 HGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACL 240
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 391 DSVLVRGVVVDKTMSHPQXPKVLRNVKLA-ILTC 489
D+ LVRG+V+D HP P R+VK A ILTC
Sbjct: 203 DTTLVRGLVLDHGARHPDMP---RHVKDAYILTC 233
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 391 DSVLVRGVVVDKTMSHPQXPKVLRNVKLA-ILTC 489
D+ LVRG+V+D HP P R+VK A ILTC
Sbjct: 203 DTTLVRGLVLDHGARHPDMP---RHVKDAYILTC 233
>Z54271-3|CAA91039.1| 713|Caenorhabditis elegans Hypothetical
protein F21D5.3 protein.
Length = 713
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 409 GVVVDKTMSHPQXPKVLRNVKLAILTCPFE 498
G+ DKT + P+ +N K +L CPF+
Sbjct: 391 GLPEDKTTPNLMHPECTQNKKCTVLNCPFQ 420
>Z71177-7|CAI46554.1| 351|Caenorhabditis elegans Hypothetical
protein AC3.10 protein.
Length = 351
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 152 GSHNHNRQLYEWDGYLCPTDLRLXQGVH 69
G +N+ + ++ W +LCP D G+H
Sbjct: 292 GKYNNFQSVFGWGLWLCPIDSSTQDGLH 319
>U00048-10|AAB53823.2| 852|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 16 protein.
Length = 852
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -2
Query: 206 LVDWESFTDAVKMGQCQGG--SHNHNRQLYEW 117
L+D S++ A+K+ Q GG S N +R L EW
Sbjct: 467 LIDMGSYSVAIKVAQWLGGETSENVDRVLLEW 498
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,746,308
Number of Sequences: 27780
Number of extensions: 179321
Number of successful extensions: 437
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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