Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2355
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p pro...    89   4e-18
AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA...    89   4e-18
BT003187-1|AAO24942.1|  629|Drosophila melanogaster RE63465p pro...    55   7e-08
AY058246-1|AAL13475.1|  797|Drosophila melanogaster GH01206p pro...    55   7e-08
AE014134-573|AAF51132.3|  797|Drosophila melanogaster CG3332-PA,...    55   7e-08
AE014134-572|AAN10385.1|  629|Drosophila melanogaster CG3332-PB,...    55   7e-08
AE014298-762|AAF46052.1|  643|Drosophila melanogaster CG17758-PA...    40   0.003
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ...    29   3.8  
AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA...    29   3.8  

>AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p protein.
          Length = 916

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = +1

Query: 1    LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKARLE 132
            L+FYGFV WS++QR TLPLCIFHRFHS VTLAEIWKT+YKARLE
Sbjct: 873  LEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYKARLE 916


>AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA
            protein.
          Length = 916

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 37/44 (84%), Positives = 41/44 (93%)
 Frame = +1

Query: 1    LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKARLE 132
            L+FYGFV WS++QR TLPLCIFHRFHS VTLAEIWKT+YKARLE
Sbjct: 873  LEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYKARLE 916


>BT003187-1|AAO24942.1|  629|Drosophila melanogaster RE63465p
           protein.
          Length = 629

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 19/42 (45%), Positives = 31/42 (73%)
 Frame = +1

Query: 1   LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKAR 126
           L+F+G   W+++   ++PL IF+RFHS + L E+WK +YKA+
Sbjct: 586 LEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVWKITYKAK 627


>AY058246-1|AAL13475.1|  797|Drosophila melanogaster GH01206p
           protein.
          Length = 797

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 19/42 (45%), Positives = 31/42 (73%)
 Frame = +1

Query: 1   LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKAR 126
           L+F+G   W+++   ++PL IF+RFHS + L E+WK +YKA+
Sbjct: 754 LEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVWKITYKAK 795


>AE014134-573|AAF51132.3|  797|Drosophila melanogaster CG3332-PA,
           isoform A protein.
          Length = 797

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 19/42 (45%), Positives = 31/42 (73%)
 Frame = +1

Query: 1   LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKAR 126
           L+F+G   W+++   ++PL IF+RFHS + L E+WK +YKA+
Sbjct: 754 LEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVWKITYKAK 795


>AE014134-572|AAN10385.1|  629|Drosophila melanogaster CG3332-PB,
           isoform B protein.
          Length = 629

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 19/42 (45%), Positives = 31/42 (73%)
 Frame = +1

Query: 1   LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKAR 126
           L+F+G   W+++   ++PL IF+RFHS + L E+WK +YKA+
Sbjct: 586 LEFFGVWGWTIITHISMPLAIFYRFHSTICLFEVWKITYKAK 627


>AE014298-762|AAF46052.1|  643|Drosophila melanogaster CG17758-PA
           protein.
          Length = 643

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = +1

Query: 1   LDFYGFVAWSLVQRFTLPLCIFHRFHS 81
           L+FYG  AW+++   ++PL IF+RFHS
Sbjct: 504 LNFYGLWAWTIITHVSMPLAIFYRFHS 530


>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
            protein.
          Length = 2515

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 25   WSLVQRFTLPLCIFHR--FHSXVT 90
            W L QRF  P C+ HR  FHS VT
Sbjct: 1113 WQLEQRFADPPCMAHRCSFHSVVT 1136


>AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA
            protein.
          Length = 2515

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 25   WSLVQRFTLPLCIFHR--FHSXVT 90
            W L QRF  P C+ HR  FHS VT
Sbjct: 1113 WQLEQRFADPPCMAHRCSFHSVVT 1136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,682,549
Number of Sequences: 53049
Number of extensions: 277827
Number of successful extensions: 370
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)