Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2355
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical ...    48   7e-06
U28737-6|AAL02486.1|  566|Caenorhabditis elegans Hypothetical pr...    45   5e-05
U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical pr...    39   0.002
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    38   0.004
Z69717-3|CAA93534.1|  617|Caenorhabditis elegans Hypothetical pr...    38   0.007
U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical pr...    38   0.007
AL009170-1|CAA15637.1|  617|Caenorhabditis elegans Hypothetical ...    38   0.007
AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical ...    37   0.013
U64845-12|AAC48025.1|  475|Caenorhabditis elegans Hypothetical p...    35   0.040

>AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical
           protein B0212.1 protein.
          Length = 649

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 1   LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKAR 126
           +++YG  +W  + R   PL IF+RFHS V  AEIWK  Y A+
Sbjct: 591 IEYYGKRSWVFLVRSFSPLTIFYRFHSSVCFAEIWKNVYAAK 632


>U28737-6|AAL02486.1|  566|Caenorhabditis elegans Hypothetical
           protein F14B8.7 protein.
          Length = 566

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +1

Query: 1   LDFYGFVAWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYK 120
           +  YG   W++V R   PL IF+RFHS    AEIWK +++
Sbjct: 512 IHMYGSYYWAIVVRGCSPLTIFYRFHSSACFAEIWKKTFR 551


>U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical
           protein F45F2.7 protein.
          Length = 623

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +1

Query: 10  YGFVAWSLVQRFTL-----PLCIFHRFHSXVTLAEIWKTSYKAR 126
           YGF A    + F L     PL +F+RFHS   LAEIWK +Y  +
Sbjct: 559 YGFPALMETKYFELLNISSPLVVFYRFHSSACLAEIWKHAYSTK 602


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 25  WSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKAR 126
           +S +   + PL +F+RFHS   LAEIWK +Y  +
Sbjct: 531 YSALLNISSPLVVFYRFHSSACLAEIWKHAYSKK 564


>Z69717-3|CAA93534.1|  617|Caenorhabditis elegans Hypothetical
           protein H19J13.1 protein.
          Length = 617

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 52  PLCIFHRFHSXVTLAEIWKTSYKAR 126
           PL +F+RFHS   LAEIWK +Y  +
Sbjct: 557 PLLVFYRFHSSACLAEIWKHTYSTK 581


>U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical
           protein F45F2.5 protein.
          Length = 556

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 22  AWSLVQRFTLPLCIFHRFHSXVTLAEIWKTSYKAR 126
           ++S +     P+ +F+RFHS   LAEIWK +Y  +
Sbjct: 503 SYSAMLNIASPIVVFYRFHSSACLAEIWKHTYSRK 537


>AL009170-1|CAA15637.1|  617|Caenorhabditis elegans Hypothetical
           protein H19J13.1 protein.
          Length = 617

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 52  PLCIFHRFHSXVTLAEIWKTSYKAR 126
           PL +F+RFHS   LAEIWK +Y  +
Sbjct: 557 PLLVFYRFHSSACLAEIWKHTYSTK 581


>AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical
           protein D1065.1 protein.
          Length = 585

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 52  PLCIFHRFHSXVTLAEIWKTSY 117
           P+ +F+RFHS   LAEIWK +Y
Sbjct: 540 PIVVFYRFHSSACLAEIWKNTY 561


>U64845-12|AAC48025.1|  475|Caenorhabditis elegans Hypothetical
           protein F45F2.1 protein.
          Length = 475

 Score = 35.1 bits (77), Expect = 0.040
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 40  RFTLPLCIFHRFHSXVTLAEIWKTSY 117
           +  LPL +F RFH  V  AEIWK  Y
Sbjct: 389 KICLPLVVFFRFHCSVCFAEIWKVYY 414


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,631,207
Number of Sequences: 27780
Number of extensions: 158024
Number of successful extensions: 190
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)