Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2353
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 44 1e-04
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 44 1e-04
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 36 0.019
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 36 0.033
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.058
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.058
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 32 0.41
U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical p... 31 0.54
U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical p... 31 0.54
U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical p... 31 0.54
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 31 0.71
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 31 0.71
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 30 1.2
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 2.2
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 6.6
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 52.4 bits (120), Expect = 3e-07
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Frame = +1
Query: 91 QESFKCPDDFGFYPHHISCDKYWKCDNG-VAELKTCGNGLAFDATDSKYLTENCDYLHNV 267
Q +F + G Y + C +C G + E +C + LAF+ LT CDY V
Sbjct: 1178 QSAFCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQ-----LTGKCDYPQKV 1232
Query: 268 E-CGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 444
C Q + CS D N C+VF+ C G C G ++ VC
Sbjct: 1233 SGCENHGQ-----TNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVC 1287
Query: 445 MWADQVPECKNE 480
W VP C +
Sbjct: 1288 DWPSAVPSCSGQ 1299
Score = 44.8 bits (101), Expect = 5e-05
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Frame = +1
Query: 151 KYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGER-TQLEPPISTP---H 315
KY +C NG A ++ CG L F+ T+ C Y V ECG + + P I+TP
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEA-----TQECTYRDEVPECGSQGSTSSPVITTPGQDQ 761
Query: 316 CSRLYGIFPDE----------NKC-------------DVFWNCWNGEASRYQCSPGLAYD 426
S YGI D+ ++C + C + AS +C L +D
Sbjct: 762 SSNYYGIPSDDVPSTTQTPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFD 821
Query: 427 RESRVCMWADQVPECKNEEVANGFGCP 507
S+ C + D+V +C+ +V++ P
Sbjct: 822 ERSQSCRFRDEVFKCQTADVSSSSTVP 848
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 331 GIFPDENKCDVFWNCWNGEASRY-QCSPGLAYDRESRVCMWADQVPECKNEEVANG 495
G++ +E C C+ GE + C LA+++ + C + +V C+N NG
Sbjct: 1188 GLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNG 1243
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 373 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGE 519
C NG A +C L ++ ++ C + D+VPEC ++ + PG+
Sbjct: 711 CSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQGSTSSPVITTPGQ 759
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 1/140 (0%)
Frame = +1
Query: 121 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEP 297
G +P+ + + C G+A + C L F+ T L CD+ +V EC
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL----- 302
Query: 298 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 477
P P C G F F C NG A C GL + + C + V EC
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC-- 359
Query: 478 EEVANGFGCPAPGEVSNAGS 537
+E + A GE S GS
Sbjct: 360 QETSGEESGEASGEQSGEGS 379
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 364 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE-EVANGFGCPAPGEVSNAGS 537
++ C A C L YD +S+ C+W V ECK + + +G G GE S S
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSG-ETSGEGSGEAS 212
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +1
Query: 310 PHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 471
P C + GI P+ F C G A C L ++ VC W V EC
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 1/140 (0%)
Frame = +1
Query: 121 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEP 297
G +P+ + + C G+A + C L F+ T L CD+ +V EC
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL----- 302
Query: 298 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 477
P P C G F F C NG A C GL + + C + V EC
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC-- 359
Query: 478 EEVANGFGCPAPGEVSNAGS 537
+E + A GE S GS
Sbjct: 360 QETSGEESGEASGEQSGEGS 379
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 364 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE-EVANGFGCPAPGEVSNAGS 537
++ C A C L YD +S+ C+W V ECK + + +G G GE S S
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSG-ETSGEGSGEAS 212
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +1
Query: 310 PHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 471
P C + GI P+ F C G A C L ++ VC W V EC
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 154 YWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEPPISTPHCSRLY 330
++ C G+A + C L F+ S +CD+ NV +C E++ E P +C +
Sbjct: 194 FFSCSEGIAHRRNCPANLVFNPAIS-----SCDWPKNVMDCSEKS--EKP---QNCGEVD 243
Query: 331 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGF 498
G F F C NG C GL + ++++C + V EC E ++GF
Sbjct: 244 GYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLE--SSGF 297
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Frame = +1
Query: 106 CPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC--- 273
C + G++ + C NG+ + C +GL F + + CDY NV EC
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKN-----QMCDYEWNVDECDLE 293
Query: 274 --GERTQLEPPISTPHCSRL-YGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 444
G + + C+ + G++ + V +C NG + ++C P L ++ S +C
Sbjct: 294 SSGFMENYKASEALTPCTNMDNGLYALDCTPRVL-SCQNGRENIFECPPSLVFNENSLIC 352
Query: 445 MWADQVPECKNEE 483
+ + +C E+
Sbjct: 353 DYPETSLKCCMED 365
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +1
Query: 364 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVS 525
F C +GEA C L Y + C W V EC E N F GE S
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEFSGDGSGESS 95
Score = 33.9 bits (74), Expect = 0.10
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 1/143 (0%)
Frame = +1
Query: 106 CPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERT 285
CP+D ++ + CD W+ + V E G F S + + + GE +
Sbjct: 55 CPEDLVYHKNLEFCD--WR--HNVFECGEEGEENEFSGDGSGESSGDEEITFGDSSGESS 110
Query: 286 QLEPPISTPHCSRLY-GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 462
E + C L G++ + C +G CS L YD ++ C W +
Sbjct: 111 GDE--LLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMI 168
Query: 463 PECKNEEVANGFGCPAPGEVSNA 531
EC +G C + G +S +
Sbjct: 169 DECSQ---VSGEYCESDGNISKS 188
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 36.3 bits (80), Expect = 0.019
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +1
Query: 106 CPDDFGFYPHHISCD-KYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER 282
CPD G Y + C KY +C N V ++C GL FD ++ E H G+R
Sbjct: 43 CPDGDGLYA--VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLAR--CERRSSNHLCATGDR 98
Query: 283 TQL---EPPISTPHCSRLYGIFP-DENKC-DVFWNCWNGEASRYQC 405
L + +S RL G + D+ C + ++ C NG + +C
Sbjct: 99 VTLNVRQKAVSINCVGRLSGDYALDKTVCNENYYQCANGISYMRKC 144
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 FPDENKCD-VFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 471
F D KC FW C NG+ R C L Y + +C + + V +C
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 373 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 474
C G + C+PGL Y+ ++ +C + V CK
Sbjct: 909 CMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCK 942
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 121 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDY-LHNVECGERTQLE- 294
G+Y S Y+ C + +C N L F +E C + + EC T L+
Sbjct: 961 GYYSAGCS-SYYFSCIDEQIRKMSCPNSLKFSKE-----SEKCVFPIDAKECSIATTLDR 1014
Query: 295 --PPISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 465
P + + C+ R G+ + + C NG A C L Y+ +++ C +
Sbjct: 1015 TPPAVPSDFCTIRSNGLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNK 1074
Query: 466 ECKNEEV 486
+C N+ +
Sbjct: 1075 DCGNDYI 1081
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 127 YPHHISCDKY-WKCDNGVAELKTCGNGLAFDATDSKYLTEN-CDYLHNV-ECGERTQLEP 297
+ ++ C Y W+C NG KTC L + L +N CD+ +V +C E E
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIY------VLDQNLCDFPESVKDCPEYNGSET 264
Query: 298 PISTP 312
P
Sbjct: 265 SYRAP 269
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.033
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 15/123 (12%)
Frame = +1
Query: 121 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTEN----CDYLHNVECGERTQ 288
GFYP+ +C + C + + +C +GL + A+ KY T + C T+
Sbjct: 487 GFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSAS-LKYCTTSTASGCSVTTTRAPTTTTK 545
Query: 289 LEPPISTP-----------HCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRES 435
P ++T C++ G F + C F C NG + ++C GL++ ++
Sbjct: 546 SAPTVTTTTRAPTTTTPAFKCTK-DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADT 604
Query: 436 RVC 444
+C
Sbjct: 605 MMC 607
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 97 SFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDA 219
+FKC D GF+ C K+ +C NG++ C NGL+F A
Sbjct: 563 AFKCTKD-GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHA 602
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +2
Query: 425 TESPASACGLIRFRS----AKTKK*QTDSAARPPVRSPTL--ARSVVTLIPKDCRKYYIC 586
T S AS C + R+ K+ T + P +P + +P DC K+ C
Sbjct: 525 TTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRC 584
Query: 587 LXGVAREYXCPIGNRF 634
+ G++ + CP G F
Sbjct: 585 VNGISYNFECPNGLSF 600
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 370 NCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEV 486
NC NG+ + + C GL + E C ADQ+ EC V
Sbjct: 543 NCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 358 DVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 477
D + C NG QC LA+D +C + VPEC N
Sbjct: 229 DHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTN 268
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 121 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 273
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 370 NCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEV 486
NC NG+ + + C GL + E C ADQ+ EC V
Sbjct: 543 NCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 358 DVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 477
D + C NG QC LA+D +C + VPEC N
Sbjct: 229 DHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTN 268
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 121 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 273
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.41
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 370 NCWNGEASRYQCSPGLAYDRESRVCMW 450
N + G R C+PG +D +S+VC+W
Sbjct: 299 NLFCGRWQRMPCAPGTVFDVQSQVCVW 325
>U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical
protein F42G9.6c protein.
Length = 659
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 392 PAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAARPPVRSPTLARSVVTLIP 559
P ISA+PD PTT SA L R S ++++ PP R+P + + +P
Sbjct: 539 PRISASPDSPTTPDIESAL-LTRRNSYGASDPTSEASPTPPQRNPNHNKRLQLYVP 593
>U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical
protein F42G9.6b protein.
Length = 683
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 392 PAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAARPPVRSPTLARSVVTLIP 559
P ISA+PD PTT SA L R S ++++ PP R+P + + +P
Sbjct: 563 PRISASPDSPTTPDIESAL-LTRRNSYGASDPTSEASPTPPQRNPNHNKRLQLYVP 617
>U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical
protein F42G9.6a protein.
Length = 657
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 392 PAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAARPPVRSPTLARSVVTLIP 559
P ISA+PD PTT SA L R S ++++ PP R+P + + +P
Sbjct: 537 PRISASPDSPTTPDIESAL-LTRRNSYGASDPTSEASPTPPQRNPNHNKRLQLYVP 591
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 31.1 bits (67), Expect = 0.71
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 232 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 408
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 149 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 200
Query: 409 PGLAYDRESRVCMWADQVPECKNE 480
PGL +C+W + NE
Sbjct: 201 PGLIESNTGPLCIWMHNKDKAANE 224
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.71
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 232 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 408
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 337 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 388
Query: 409 PGLAYDRESRVCMWADQVPECKNE 480
PGL +C+W + NE
Sbjct: 389 PGLIESNTGPLCIWMHNKDKAANE 412
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.71
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 232 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 408
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 337 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 388
Query: 409 PGLAYDRESRVCMWADQVPECKNE 480
PGL +C+W + NE
Sbjct: 389 PGLIESNTGPLCIWMHNKDKAANE 412
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 401 SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAARPPVRSPTLARSVVTLIPKDCRKYY 580
+ AP+ +TE P+S+ ++ + + ++ PP S T ++ T +P DC Y
Sbjct: 906 TTAPETTSTEPPSSSTTPVQTTTITAPE---TTSTEPPSSSTTPVQTTTTTVPCDCSLSY 962
Query: 581 I 583
I
Sbjct: 963 I 963
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 316 CSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 444
C + D + CD +C GEA Y C+ Y + R C
Sbjct: 1236 CVSMSSCLDDRSLCDENADCVPGEAGHYVCNCHYGYHGDGRSC 1278
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 136 HISCDKYWKCDNGVAELKTCGNGLAFDAT 222
H +K+WKC+ G + TC +DAT
Sbjct: 29 HFDSNKFWKCEGGRWIVVTCQINYFYDAT 57
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 121 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFD 216
G+ P +C +++C +G+ ++CG G +D
Sbjct: 164 GYKPDVYNCKNFYQCASGLWTQRSCGEGTIWD 195
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +1
Query: 145 CDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHCSR 324
CD+ KC NGV TC G D Y + C+ + C + + I + C+
Sbjct: 376 CDQNAKCSNGVC---TCSEGFTGDGFRC-YDVDECE-IPGAVCRDHSICSNTIGSFECTC 430
Query: 325 LYGIFPDENKCDVFWNC 375
G ++ KC+ C
Sbjct: 431 HGGYRFEDGKCEDVDEC 447
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 287 SSSPQSPLPTVRDCTASSLMKXXXXXXXXXXXEKPPAISAAPDLPTTESP 436
+++P +P PTV++ TA+ PP + AP PTT++P
Sbjct: 152 ATAPVTPEPTVKNTTAAE--PTTEAPPPPTTKAPPPPTTKAPPPPTTKAP 199
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 352 KCDVFWNCWNGEASRYQCSPGLAYDRESRVC 444
+CDV C+NG Y C G +++ R+C
Sbjct: 1593 QCDVSKFCFNGTNDNYICQNGGRCNKDLRLC 1623
>U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical
protein F32E10.8 protein.
Length = 134
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 100 FKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKY 234
F+C D + CDKY C +G E + C L T Y
Sbjct: 90 FRCTDSSSCIAPNRVCDKYKDCRDGSDERENCNQPLGTPNTTVIY 134
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = +1
Query: 175 VAELKTCGNGLAFDATDSKYLTEN-----CDYLHNVE--CGERTQLEP 297
+ E +TCG+ ++F A KYL++ D + +++ C E ++++P
Sbjct: 69 IIECRTCGHSISFHAEPLKYLSQEDLDTYTDQISDLQTCCSELSEIDP 116
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = +2
Query: 287 SSSPQSPLPTVRDCTASSLMKXXXXXXXXXXXEKPPAISAAPDLPTTESPAS 442
SS +P P R TA+ + PPA + AP T +PAS
Sbjct: 287 SSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAPAS 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,742,847
Number of Sequences: 27780
Number of extensions: 327591
Number of successful extensions: 1109
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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