Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2348
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.    292   4e-79
AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p pro...   292   4e-79
AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA...   292   4e-79
AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p pro...   286   2e-77
AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA...   286   2e-77
L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic r...    31   1.6  
AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA...    31   1.6  

>U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.
          Length = 228

 Score =  292 bits (716), Expect = 4e-79
 Identities = 140/171 (81%), Positives = 153/171 (89%)
 Frame = +2

Query: 53  EAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 232
           E    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGRY
Sbjct: 22  EVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRY 80

Query: 233 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 412
           A KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+AI
Sbjct: 81  AAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAI 140

Query: 413 INSGPREDSTXIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARXAAFXNIK 565
           INSGPREDST IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAR AAF NIK
Sbjct: 141 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 191



 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +3

Query: 561 LKTIAECVADELINAAXGSSNSYAIKXKDXLER 659
           +KTIAEC+ADELINAA GSSNSYAIK KD LER
Sbjct: 190 IKTIAECLADELINAAKGSSNSYAIKKKDELER 222


>AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p
           protein.
          Length = 228

 Score =  292 bits (716), Expect = 4e-79
 Identities = 140/171 (81%), Positives = 153/171 (89%)
 Frame = +2

Query: 53  EAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 232
           E    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGRY
Sbjct: 22  EVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRY 80

Query: 233 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 412
           A KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+AI
Sbjct: 81  AAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAI 140

Query: 413 INSGPREDSTXIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARXAAFXNIK 565
           INSGPREDST IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAR AAF NIK
Sbjct: 141 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 191



 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +3

Query: 561 LKTIAECVADELINAAXGSSNSYAIKXKDXLER 659
           +KTIAEC+ADELINAA GSSNSYAIK KD LER
Sbjct: 190 IKTIAECLADELINAAKGSSNSYAIKKKDELER 222


>AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA
           protein.
          Length = 228

 Score =  292 bits (716), Expect = 4e-79
 Identities = 140/171 (81%), Positives = 153/171 (89%)
 Frame = +2

Query: 53  EAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRY 232
           E    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGRY
Sbjct: 22  EVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRY 80

Query: 233 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 412
           A KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+AI
Sbjct: 81  AAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAI 140

Query: 413 INSGPREDSTXIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARXAAFXNIK 565
           INSGPREDST IGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAR AAF NIK
Sbjct: 141 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 191



 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +3

Query: 561 LKTIAECVADELINAAXGSSNSYAIKXKDXLER 659
           +KTIAEC+ADELINAA GSSNSYAIK KD LER
Sbjct: 190 IKTIAECLADELINAAKGSSNSYAIKKKDELER 222


>AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p
           protein.
          Length = 230

 Score =  286 bits (702), Expect = 2e-77
 Identities = 137/180 (76%), Positives = 153/180 (85%)
 Frame = +2

Query: 26  EENWNDDVXEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 205
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 206 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 385
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 386 PLQVLVTAIINSGPREDSTXIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARXAAFXNIK 565
           PLQV V AI+NSGPREDST IGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAR AAF NIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 561 LKTIAECVADELINAAXGSSNSYAIKXKDXLER 659
           +KT+AEC+ADELINAA GSSNSYAIK KD LER
Sbjct: 192 IKTVAECLADELINAAKGSSNSYAIKKKDELER 224


>AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA
           protein.
          Length = 230

 Score =  286 bits (702), Expect = 2e-77
 Identities = 137/180 (76%), Positives = 153/180 (85%)
 Frame = +2

Query: 26  EENWNDDVXEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 205
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 206 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 385
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 386 PLQVLVTAIINSGPREDSTXIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARXAAFXNIK 565
           PLQV V AI+NSGPREDST IGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAR AAF NIK
Sbjct: 134 PLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIK 193



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 561 LKTIAECVADELINAAXGSSNSYAIKXKDXLER 659
           +KT+AEC+ADELINAA GSSNSYAIK KD LER
Sbjct: 192 IKTVAECLADELINAAKGSSNSYAIKKKDELER 224


>L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic
           receptor protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 208 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 104
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


>AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA
           protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 208 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 104
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,986,441
Number of Sequences: 53049
Number of extensions: 648536
Number of successful extensions: 1441
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)