Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2347
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127649-1|AAI27650.1| 140|Homo sapiens transmembrane protein 1... 48 1e-05
AY358525-1|AAQ88889.1| 140|Homo sapiens GRVS638 protein. 48 1e-05
BC070231-1|AAH70231.1| 139|Homo sapiens TMEM107 protein protein. 43 4e-04
AF311338-1|AAK38512.1| 141|Homo sapiens DC20 protein. 36 0.064
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 30 4.2
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 30 4.2
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 30 4.2
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 29 9.7
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 29 9.7
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 29 9.7
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 29 9.7
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC060851-1|AAH60851.1| 742|Homo sapiens LOC401010 protein protein. 29 9.7
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 29 9.7
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC003555-1|AAH03555.1| 749|Homo sapiens nucleolar complex assoc... 29 9.7
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 29 9.7
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 29 9.7
AL645608-6|CAI15568.1| 749|Homo sapiens novel protein protein. 29 9.7
AK127891-1|BAC87177.1| 163|Homo sapiens protein ( Homo sapiens ... 29 9.7
AK022756-1|BAB14230.1| 521|Homo sapiens protein ( Homo sapiens ... 29 9.7
>BC127649-1|AAI27650.1| 140|Homo sapiens transmembrane protein 107
protein.
Length = 140
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +2
Query: 209 LXRARFLTLVSHLCASITLLWGTEQLVLPCLPKIGDEXLFNMYHNRFKIGLASSVTLIIL 388
L +RFLTL++HL ITL W + + CLP ++ + L+ ++ L +
Sbjct: 7 LVPSRFLTLLAHLVVVITLFWSRDSNIQACLPLTFTPEEYDKQDIQLVAALSVTLGLFAV 66
Query: 389 ELANFMYGITMXTPFVCLIS 448
ELA F+ G++M LIS
Sbjct: 67 ELAGFLSGVSMFNSTQSLIS 86
>AY358525-1|AAQ88889.1| 140|Homo sapiens GRVS638 protein.
Length = 140
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +2
Query: 209 LXRARFLTLVSHLCASITLLWGTEQLVLPCLPKIGDEXLFNMYHNRFKIGLASSVTLIIL 388
L +RFLTL++HL ITL W + + CLP ++ + L+ ++ L +
Sbjct: 7 LVPSRFLTLLAHLVVVITLFWSRDSNIQACLPLTFTPEEYDKQDIQLVAALSVTLGLFAV 66
Query: 389 ELANFMYGITMXTPFVCLIS 448
ELA F+ G++M LIS
Sbjct: 67 ELAGFLSGVSMFNSTQSLIS 86
>BC070231-1|AAH70231.1| 139|Homo sapiens TMEM107 protein protein.
Length = 139
Score = 43.2 bits (97), Expect = 4e-04
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +2
Query: 209 LXRARFLTLVSHLCASITLLWGTEQLVLPCLP------KIGDEXLFNMYHNRFKIGLASS 370
L +RFLTL++HL ITL W + + CLP + + + + R L+ +
Sbjct: 7 LVPSRFLTLLAHLVVVITLFWSRDSNIQACLPLTFTPEEYDKQDIHPLPLCRLVAALSVT 66
Query: 371 VTLIILELANFMYGITMXTPFVCLIS 448
+ L +ELA F+ G++M LIS
Sbjct: 67 LGLFAVELAGFLSGVSMFNSTQSLIS 92
>AF311338-1|AAK38512.1| 141|Homo sapiens DC20 protein.
Length = 141
Score = 35.9 bits (79), Expect = 0.064
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 209 LXRARFLTLVSHLCASITLLWGTEQLVLPCLP 304
L +RFLTL++HL ITL W + + CLP
Sbjct: 7 LVPSRFLTLLAHLVVVITLFWSRDSNIQACLP 38
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 225 NLARXRMSVPCIPLFTGQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEI 49
N A P P + DK A+ + V+ ++N F RN+TK VFV Q I
Sbjct: 68 NPATAVSGTPAPPARSQADKPVL-AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 126
Query: 48 KRDTISKMINS 16
KR+ K + S
Sbjct: 127 KRNNPRKFLRS 137
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 225 NLARXRMSVPCIPLFTGQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEI 49
N A P P + DK A+ + V+ ++N F RN+TK VFV Q I
Sbjct: 68 NPATAVSGTPAPPARSQADKPVL-AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 126
Query: 48 KRDTISKMINS 16
KR+ K + S
Sbjct: 127 KRNNPRKFLRS 137
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 225 NLARXRMSVPCIPLFTGQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEI 49
N A P P + DK A+ + V+ ++N F RN+TK VFV Q I
Sbjct: 68 NPATAVSGTPAPPARSQADKPVL-AIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAI 126
Query: 48 KRDTISKMINS 16
KR+ K + S
Sbjct: 127 KRNNPRKFLRS 137
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 89 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 142
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC060851-1|AAH60851.1| 742|Homo sapiens LOC401010 protein protein.
Length = 742
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 ILXRARFLTLVSHLCASITLLWGTEQLVLPCLPKIGDEXLFNMYHNRFKIGLASSVTL-- 379
++ ARF L H ++TLL G+ +P LP I + +F K G SS +
Sbjct: 438 LIPTARFYPLRMHCIRALTLLSGSSGAFIPVLPFILE--MFQQVDFSKKPGCMSSKPINF 495
Query: 380 -IILELAN 400
+IL+L+N
Sbjct: 496 SVILKLSN 503
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC003555-1|AAH03555.1| 749|Homo sapiens nucleolar complex
associated 2 homolog (S. cerevisiae) protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 ILXRARFLTLVSHLCASITLLWGTEQLVLPCLPKIGDEXLFNMYHNRFKIGLASSVTL-- 379
++ ARF L H ++TLL G+ +P LP I + +F K G SS +
Sbjct: 445 LIPTARFYPLRMHCIRALTLLSGSSGAFIPVLPFILE--MFQQVDFNRKPGRMSSKPINF 502
Query: 380 -IILELAN 400
+IL+L+N
Sbjct: 503 SVILKLSN 510
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 28.7 bits (61), Expect = 9.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 177 GQDKSKFYAVPIFNXVRT-TIQNFPKFHVRNETKISVFVFQLEIKRDTISKMINS 16
G DK K A + V+ ++N F RN+TK VFV Q IK++ K + S
Sbjct: 49 GGDK-KVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS 102
>AL645608-6|CAI15568.1| 749|Homo sapiens novel protein protein.
Length = 749
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 ILXRARFLTLVSHLCASITLLWGTEQLVLPCLPKIGDEXLFNMYHNRFKIGLASSVTL-- 379
++ ARF L H ++TLL G+ +P LP I + +F K G SS +
Sbjct: 445 LIPTARFYPLRMHCIRALTLLSGSSGAFIPVLPFILE--MFQQVDFNRKPGRMSSKPINF 502
Query: 380 -IILELAN 400
+IL+L+N
Sbjct: 503 SVILKLSN 510
>AK127891-1|BAC87177.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ45997 fis, clone SMINT2003641. ).
Length = 163
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 209 LXRARFLTLVSHLCASITLLW 271
L +RFLTL++HL ITL W
Sbjct: 7 LVPSRFLTLLAHLVVVITLFW 27
>AK022756-1|BAB14230.1| 521|Homo sapiens protein ( Homo sapiens
cDNA FLJ12694 fis, clone NT2RP1000358, highly similar to
Homo sapiens mRNA; cDNA DKFZp564C186 (from clone
DKFZp564C186). ).
Length = 521
Score = 28.7 bits (61), Expect = 9.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 206 ILXRARFLTLVSHLCASITLLWGTEQLVLPCLPKIGDEXLFNMYHNRFKIGLASSVTL-- 379
++ ARF L H ++TLL G+ +P LP I + +F K G SS +
Sbjct: 212 LIPTARFYPLRMHCIRALTLLSGSSGAFIPVLPFILE--MFQQVDFNRKPGRMSSKPINF 269
Query: 380 -IILELAN 400
+IL+L+N
Sbjct: 270 SVILKLSN 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,516,278
Number of Sequences: 237096
Number of extensions: 1075351
Number of successful extensions: 1636
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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