Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2342
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclas... 30 1.2
Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF039042-9|AAC48245.1| 431|Caenorhabditis elegans Hypothetical ... 28 4.9
AF025460-4|AAB70987.1| 156|Caenorhabditis elegans Hypothetical ... 28 4.9
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 27 8.6
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 27 8.6
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 27 8.6
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 27 8.6
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 27 8.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 8.6
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 27 8.6
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 27 8.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 8.6
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 27 8.6
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 27 8.6
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 27 8.6
>U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclase
protein 15 protein.
Length = 1000
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 25 PCVLTVAGPQKPRYCAS*TEYKGIVYTASQPKLDLTPKFSWV 150
PCV V G + PRYC + V TAS+ + + KF WV
Sbjct: 882 PCVAGVVGLKMPRYCL----FGDTVNTASRMESNGIRKFFWV 919
>Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical
protein F58B4.1b protein.
Length = 611
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -3
Query: 278 ISFFTMQVSKYETHMYVNKSH*RLSPTFVEAFP*THITSNFEKTQLNFGVKSSFG 114
+ FF Q S+Y+ Y++ ++ + P++VE F TSN T N+G+ +G
Sbjct: 257 LGFFHTQ-SRYDRDNYISINYANIDPSYVEQF--DKETSN---TNFNYGMPYDYG 305
>Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical
protein F58B4.1a protein.
Length = 578
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -3
Query: 278 ISFFTMQVSKYETHMYVNKSH*RLSPTFVEAFP*THITSNFEKTQLNFGVKSSFG 114
+ FF Q S+Y+ Y++ ++ + P++VE F TSN T N+G+ +G
Sbjct: 257 LGFFHTQ-SRYDRDNYISINYANIDPSYVEQF--DKETSN---TNFNYGMPYDYG 305
>AF039042-9|AAC48245.1| 431|Caenorhabditis elegans Hypothetical
protein ZK697.2 protein.
Length = 431
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 263 MQVSKYETHMYVNKSH*RLSPTFVEAFP*THITSNFEKTQL 141
M+ Y+T+ Y N++ + +V FP H+ + EKT L
Sbjct: 209 MKPLSYDTYRYKNRNDYTMILDYVNRFPEFHLLNKSEKTVL 249
>AF025460-4|AAB70987.1| 156|Caenorhabditis elegans Hypothetical
protein F53A3.1 protein.
Length = 156
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 353 FSVILLFL----KWXQYI*XQTFNCLNVFISFFTMQVSKYE 243
F VI++FL +W Y TF+ L +F SFFT+ + +E
Sbjct: 24 FIVIMVFLDGRHQWYMYNAILTFSFLALFYSFFTILLRFFE 64
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 439 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 469
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 549 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 579
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1453 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1483
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1453 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1483
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1453 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1483
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1459 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1489
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1459 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1489
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1453 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1483
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1459 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1489
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 1459 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 1489
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 556 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 586
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 49 PQKP--RYCAS*TEYKGIVYTASQPKLDLTP 135
PQ+P S EY G + TA PK DLTP
Sbjct: 629 PQQPICTLAISLPEYTGEIKTAPPPKKDLTP 659
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,601,584
Number of Sequences: 27780
Number of extensions: 177260
Number of successful extensions: 405
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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