Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2340
(518 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13744-1|AAA58361.1| 568|Homo sapiens AF-9 protein. 33 0.79
BX649194-1|CAE46213.1| 298|Homo sapiens hypothetical protein pr... 33 0.79
AL512635-1|CAH70705.1| 568|Homo sapiens myeloid/lymphoid or mix... 33 0.79
AL354879-1|CAI14771.1| 568|Homo sapiens myeloid/lymphoid or mix... 33 0.79
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 32 1.4
BC036089-1|AAH36089.1| 568|Homo sapiens myeloid/lymphoid or mix... 32 1.4
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 32 1.4
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 31 1.8
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 30 4.2
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 30 4.2
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 30 4.2
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 30 4.2
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 30 4.2
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 30 4.2
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 30 4.2
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 30 4.2
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 30 4.2
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 30 4.2
>L13744-1|AAA58361.1| 568|Homo sapiens AF-9 protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.79
Identities = 23/93 (24%), Positives = 39/93 (41%)
Frame = -1
Query: 497 SSSDESPGAGLSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKKK 318
SSS S + S + S + S++ SST +S+P + + S+D+R K
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216
Query: 317 TDSIDLRDPNGLRRRVSRFECETRLVKSHCLEP 219
RD N + S+ E + +K + P
Sbjct: 217 AFKEPSRDHNKSSKESSKKPKENKPLKEEKIVP 249
>BX649194-1|CAE46213.1| 298|Homo sapiens hypothetical protein
protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.79
Identities = 23/93 (24%), Positives = 39/93 (41%)
Frame = -1
Query: 497 SSSDESPGAGLSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKKK 318
SSS S + S + S + S++ SST +S+P + + S+D+R K
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216
Query: 317 TDSIDLRDPNGLRRRVSRFECETRLVKSHCLEP 219
RD N + S+ E + +K + P
Sbjct: 217 AFKEPSRDHNKSSKESSKKPKENKPLKEEKIVP 249
>AL512635-1|CAH70705.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.79
Identities = 23/93 (24%), Positives = 39/93 (41%)
Frame = -1
Query: 497 SSSDESPGAGLSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKKK 318
SSS S + S + S + S++ SST +S+P + + S+D+R K
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216
Query: 317 TDSIDLRDPNGLRRRVSRFECETRLVKSHCLEP 219
RD N + S+ E + +K + P
Sbjct: 217 AFKEPSRDHNKSSKESSKKPKENKPLKEEKIVP 249
>AL354879-1|CAI14771.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 32.7 bits (71), Expect = 0.79
Identities = 23/93 (24%), Positives = 39/93 (41%)
Frame = -1
Query: 497 SSSDESPGAGLSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKKK 318
SSS S + S + S + S++ SST +S+P + + S+D+R K
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216
Query: 317 TDSIDLRDPNGLRRRVSRFECETRLVKSHCLEP 219
RD N + S+ E + +K + P
Sbjct: 217 AFKEPSRDHNKSSKESSKKPKENKPLKEEKIVP 249
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 146 TPLXPKPAYPNPARICSLWSPESRE 220
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>BC036089-1|AAH36089.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/93 (24%), Positives = 39/93 (41%)
Frame = -1
Query: 497 SSSDESPGAGLSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKKK 318
SSS S + S + S + S++ SST +S+P + + S+D+R K
Sbjct: 157 SSSSSSSSSSSSSSSSGSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKS 216
Query: 317 TDSIDLRDPNGLRRRVSRFECETRLVKSHCLEP 219
RD N + S+ E + +K + P
Sbjct: 217 AFKEPSRDHNKSSKESSKKPKENKPLKEEKIVP 249
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 146 TPLXPKPAYPNPARICSLWSPESRE 220
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 31.5 bits (68), Expect = 1.8
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -1
Query: 473 AGLSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSR 339
+G S R +HD+ PS PR+ R S+D S PR PD R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 608 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 667
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 668 KTKTQEISRPN 678
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 340 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 399
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 400 KTKTQEISRPN 410
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 608 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 667
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 668 KTKTQEISRPN 678
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 340 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 399
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 400 KTKTQEISRPN 410
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 608 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 667
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 668 KTKTQEISRPN 678
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 37 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 96
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 97 KTKTQEISRPN 107
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 54 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 113
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 114 KTKTQEISRPN 124
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 54 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSLLKSNKRQREKVASDTEEADRTSSK 113
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 114 KTKTQEISRPN 124
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 608 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 667
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 668 KTKTQEISRPN 678
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 497 SSSDESPGAG-LSLNRSQHDAXLPSTTPRQERKSSTDYSEPRHRTELXPDLRSRDARVKK 321
SS SP A S N S+ + S +E SS S R R ++ D D K
Sbjct: 594 SSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK 653
Query: 320 KTDSIDLRDPN 288
KT + ++ PN
Sbjct: 654 KTKTQEISRPN 664
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,990,196
Number of Sequences: 237096
Number of extensions: 1388505
Number of successful extensions: 3610
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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