Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2336
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    26   1.3  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.0  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.2  

>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 286 KQFTPDKKSVRLEGTNNATETI 351
           +  TPD+++V   G NN T++I
Sbjct: 222 RPITPDQQTVESSGVNNTTDSI 243


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 560 IEVRSSIMQWLPHPPIQEMGGKVVHTRSSSQPHKS*SN 673
           +  RS +++W+ H P         H+  SS+PH S +N
Sbjct: 827 VATRSGLLRWIDHLP---------HSEDSSEPHFSETN 855


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 590 LPHPPIQEMGGKVVHTRSSSQPHKS*SNE 676
           +P+      GG   HT SS +PH S  +E
Sbjct: 694 IPNNGDVHQGGDSNHTSSSPKPHDSHDDE 722


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,720
Number of Sequences: 2352
Number of extensions: 16583
Number of successful extensions: 87
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)