Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2330
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.99 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.0  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   7.0  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   7.0  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   7.0  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   7.0  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   7.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   9.2  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   9.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 434  ISKLGRSXSLSHHFRNTETSSLVHSLGSGGRP 339
            I+ L  S S+ + + N    S+ +  G+GG P
Sbjct: 2050 INTLNTSYSIDYEYENDNLRSIKYPFGAGGEP 2081


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 186 NESCKLTTAVWAQYGAATATIQSNRTIMALPTTLGATASFTAW*HQXATASRSSARTKT 362
           + SC L+T +  Q   A A++QS    + +    GAT+S  +  ++   +   SAR KT
Sbjct: 129 SSSCSLST-LETQTATAGASVQS----LPIAIATGATSSTVSLTYEDELSPGGSARRKT 182


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 346 PPEPRLWTREDVSVFLKWCEREXDLPNFDMDLFQMNGKALCLLTKTD 486
           PP P+ W  ED+ V L    +E   P+  + L  +  K   +  +TD
Sbjct: 513 PPIPQRWQDEDILVVLSKIMQECWHPSPAVRLTALRVKKTLVKLETD 559


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 458 KHYACLLKQIWVKXCPGAGDVLH-NVXSNACTRP 556
           + Y C +K  W   CP AG  LH NV  + C  P
Sbjct: 53  RFYECHMKDAWEYECP-AG--LHFNVAIDVCDFP 83


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 458 KHYACLLKQIWVKXCPGAGDVLH-NVXSNACTRP 556
           + Y C +K  W   CP AG  LH NV  + C  P
Sbjct: 53  RFYECHMKDAWEYECP-AG--LHFNVAIDVCDFP 83


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 458 KHYACLLKQIWVKXCPGAGDVLH-NVXSNACTRP 556
           + Y C +K  W   CP AG  LH NV  + C  P
Sbjct: 53  RFYECHMKDAWEYECP-AG--LHFNVAIDVCDFP 83


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 458 KHYACLLKQIWVKXCPGAGDVLH-NVXSNACTRP 556
           + Y C +K  W   CP AG  LH NV  + C  P
Sbjct: 53  RFYECHMKDAWEYECP-AG--LHFNVAIDVCDFP 83


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 458 KHYACLLKQIWVKXCPGAGDVLH-NVXSNACTRP 556
           + Y C +K  W   CP AG  LH NV  + C  P
Sbjct: 53  RFYECHMKDAWEYECP-AG--LHFNVAIDVCDFP 83


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 458 KHYACLLKQIWVKXCPGAGDVLH-NVXSNACTRP 556
           + Y C +K  W   CP AG  LH N+  + C  P
Sbjct: 53  RFYECHMKDAWEYECP-AG--LHFNIAIDVCDFP 83


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +2

Query: 458 KHYACLLKQIWVKXCPGAGDVLH-NVXSNACTRP 556
           + Y C +K  W   CP AG  LH N+  + C  P
Sbjct: 53  RFYECHMKDAWEYECP-AG--LHFNIAIDVCDFP 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,589
Number of Sequences: 2352
Number of extensions: 13377
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)