Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2330
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr...    27   9.8  
X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.      27   9.8  

>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
           protein W05B2.2 protein.
          Length = 1278

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 59  LCTLNSVLTFVMIMYVY*VVQFLFST 136
           +C+LN+ +TF++I+Y+   + F F T
Sbjct: 1   MCSLNNQVTFILIIYIQ--ISFTFGT 24


>X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 201 LTTAVWAQYGAATATIQSNRTIMALPTTLGATASFTAW*HQXATASRSSARTKTMDQR 374
           LTT         T T+Q++ T+   P+   AT + T       TA+ SS+ T    Q+
Sbjct: 366 LTTTTEVISDVPTTTVQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQK 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,356,584
Number of Sequences: 27780
Number of extensions: 265543
Number of successful extensions: 679
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)