Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2328
(400 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein. 259 2e-69
L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein. 248 5e-66
BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting... 248 5e-66
BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting... 248 5e-66
AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform... 248 5e-66
L35249-1|AAA58661.1| 511|Homo sapiens vacuolar H+-ATPase 56,000... 61 2e-09
X62949-1|CAA44721.1| 511|Homo sapiens vacuolar isoform 2 of H+A... 60 4e-09
M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein. 60 4e-09
BC007309-1|AAH07309.1| 501|Homo sapiens ATP6V1B2 protein protein. 60 4e-09
BC003100-1|AAH03100.1| 511|Homo sapiens ATPase, H+ transporting... 60 4e-09
M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembr... 59 6e-09
BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting... 59 6e-09
AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting... 59 6e-09
AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subuni... 59 6e-09
BC030640-1|AAH30640.1| 511|Homo sapiens ATPase, H+ transporting... 58 8e-09
X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312) p... 33 0.26
X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for ... 33 0.26
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 33 0.26
M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein. 33 0.26
D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein. 33 0.26
DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP synth... 33 0.26
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 33 0.26
AL360230-1|CAH73145.1| 255|Homo sapiens novel protein, possible... 30 3.3
AL353576-1|CAH72610.1| 255|Homo sapiens novel protein, possible... 30 3.3
X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for ... 28 9.9
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 28 9.9
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 28 9.9
BC117698-1|AAI17699.1| 1358|Homo sapiens NWD1 protein protein. 28 9.9
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 28 9.9
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 28 9.9
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 28 9.9
>L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein.
Length = 615
Score = 259 bits (635), Expect = 2e-69
Identities = 121/131 (92%), Positives = 123/131 (93%)
Frame = +2
Query: 8 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGA 187
STSRWAEALREISGRLAEMPADSGYPAYLGARLASFY RAGRVKCLGNPDREGS SIVGA
Sbjct: 348 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPDREGSVSIVGA 407
Query: 188 XSPPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRALDDFYEKNY 367
SPPGGDFSDPVT ATLGIV VFWGLDKKLAQRKH PSINWLI YSKYMRALDDFY+KN+
Sbjct: 408 VSPPGGDFSDPVTTATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDKNF 467
Query: 368 PEFVPLMTKVK 400
PEFVPL TKVK
Sbjct: 468 PEFVPLRTKVK 478
>L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein.
Length = 617
Score = 248 bits (607), Expect = 5e-66
Identities = 114/131 (87%), Positives = 122/131 (93%)
Frame = +2
Query: 8 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGA 187
STSRWAEALREISGRLAEMPADSGYPAYLGARLASFY RAGRVKCLGNP+REGS SIVGA
Sbjct: 350 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGA 409
Query: 188 XSPPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRALDDFYEKNY 367
SPPGGDFSDPVT+ATLGIV VFWGLDKKLAQRKH PS+NWLI YSKYMRALD++Y+K++
Sbjct: 410 VSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF 469
Query: 368 PEFVPLMTKVK 400
EFVPL TK K
Sbjct: 470 TEFVPLRTKAK 480
>BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A, isoform 1 protein.
Length = 617
Score = 248 bits (607), Expect = 5e-66
Identities = 114/131 (87%), Positives = 122/131 (93%)
Frame = +2
Query: 8 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGA 187
STSRWAEALREISGRLAEMPADSGYPAYLGARLASFY RAGRVKCLGNP+REGS SIVGA
Sbjct: 350 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGA 409
Query: 188 XSPPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRALDDFYEKNY 367
SPPGGDFSDPVT+ATLGIV VFWGLDKKLAQRKH PS+NWLI YSKYMRALD++Y+K++
Sbjct: 410 VSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF 469
Query: 368 PEFVPLMTKVK 400
EFVPL TK K
Sbjct: 470 TEFVPLRTKAK 480
>BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A protein.
Length = 617
Score = 248 bits (607), Expect = 5e-66
Identities = 114/131 (87%), Positives = 122/131 (93%)
Frame = +2
Query: 8 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGA 187
STSRWAEALREISGRLAEMPADSGYPAYLGARLASFY RAGRVKCLGNP+REGS SIVGA
Sbjct: 350 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGA 409
Query: 188 XSPPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRALDDFYEKNY 367
SPPGGDFSDPVT+ATLGIV VFWGLDKKLAQRKH PS+NWLI YSKYMRALD++Y+K++
Sbjct: 410 VSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF 469
Query: 368 PEFVPLMTKVK 400
EFVPL TK K
Sbjct: 470 TEFVPLRTKAK 480
>AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform
VA68 protein.
Length = 617
Score = 248 bits (607), Expect = 5e-66
Identities = 114/131 (87%), Positives = 122/131 (93%)
Frame = +2
Query: 8 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGA 187
STSRWAEALREISGRLAEMPADSGYPAYLGARLASFY RAGRVKCLGNP+REGS SIVGA
Sbjct: 350 STSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGA 409
Query: 188 XSPPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRALDDFYEKNY 367
SPPGGDFSDPVT+ATLGIV VFWGLDKKLAQRKH PS+NWLI YSKYMRALD++Y+K++
Sbjct: 410 VSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHF 469
Query: 368 PEFVPLMTKVK 400
EFVPL TK K
Sbjct: 470 TEFVPLRTKAK 480
>L35249-1|AAA58661.1| 511|Homo sapiens vacuolar H+-ATPase 56,000
subunit protein.
Length = 511
Score = 60.9 bits (141), Expect = 2e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 301 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILT 355
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 356 MPNDDITHPIPDLTGYITEGLIYVDRQLHNRQIYPPINVLPSLSRLMKS 404
>X62949-1|CAA44721.1| 511|Homo sapiens vacuolar isoform 2 of
H+ATPase Mr 56,000 subunit protein.
Length = 511
Score = 59.7 bits (138), Expect = 4e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 301 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILT 355
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 356 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 404
>M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein.
Length = 406
Score = 59.7 bits (138), Expect = 4e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 196 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILT 250
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 251 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 299
>BC007309-1|AAH07309.1| 501|Homo sapiens ATP6V1B2 protein protein.
Length = 501
Score = 59.7 bits (138), Expect = 4e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 291 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILT 345
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 346 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 394
>BC003100-1|AAH03100.1| 511|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B2 protein.
Length = 511
Score = 59.7 bits (138), Expect = 4e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 301 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRNGSITQIPILT 355
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 356 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 404
>M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembrane
proton pump subunit mRNA, complete cds. ).
Length = 511
Score = 58.8 bits (136), Expect = 6e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 293 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRGGSITQIPILT 347
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 348 MPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 396
>BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B1 (Renal tubular acido
protein.
Length = 513
Score = 58.8 bits (136), Expect = 6e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 295 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRGGSITQIPILT 349
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 350 MPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 398
>AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kD, V1 subunit B, isoform 1 variant
protein.
Length = 513
Score = 58.8 bits (136), Expect = 6e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 295 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRGGSITQIPILT 349
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 350 MPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 398
>AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subunit
protein.
Length = 426
Score = 58.8 bits (136), Expect = 6e-09
Identities = 38/109 (34%), Positives = 57/109 (52%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV+ R GS + + +
Sbjct: 259 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVE-----GRGGSITQIPILT 313
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 314 MPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 362
>BC030640-1|AAH30640.1| 511|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B2 protein.
Length = 511
Score = 58.4 bits (135), Expect = 8e-09
Identities = 38/109 (34%), Positives = 56/109 (51%)
Frame = +2
Query: 14 SRWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXS 193
S +AEALRE+S E+P G+P Y+ LA+ Y RAGRV R GS + + +
Sbjct: 301 SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRV-----GGRNGSITQIPILT 355
Query: 194 PPGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYMRA 340
P D + P+ T I +D++L R+ P IN L S+ M++
Sbjct: 356 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKS 404
>X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312)
protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +2
Query: 17 RWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
R+ +A E+S L +P+ GY L + + R K +GS + V A
Sbjct: 93 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYV 145
Query: 197 PGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYM 334
P D +DP A T + L + +A+ P+++ L S+ M
Sbjct: 146 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 191
>X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for
F1-ATPase beta subunit (F-1 beta). ).
Length = 539
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +2
Query: 17 RWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
R+ +A E+S L +P+ GY L + + R K +GS + V A
Sbjct: 320 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYV 372
Query: 197 PGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYM 334
P D +DP A T + L + +A+ P+++ L S+ M
Sbjct: 373 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 418
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +2
Query: 17 RWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
R+ +A E+S L +P+ GY L + + R K +GS + V A
Sbjct: 310 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYV 362
Query: 197 PGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYM 334
P D +DP A T + L + +A+ P+++ L S+ M
Sbjct: 363 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 408
>M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +2
Query: 17 RWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
R+ +A E+S L +P+ GY L + + R K +GS + V A
Sbjct: 310 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYV 362
Query: 197 PGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYM 334
P D +DP A T + L + +A+ P+++ L S+ M
Sbjct: 363 PADDLTDPAPATTFADLDATTVLSRAIAELGIYPAVDPLDSTSRIM 408
>D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +2
Query: 17 RWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
R+ +A E+S L +P+ GY L + + R K +GS + V A
Sbjct: 320 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYV 372
Query: 197 PGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYM 334
P D +DP A T + L + +A+ P+++ L S+ M
Sbjct: 373 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 418
>DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP
synthase, H+ transporting F1 complex beta subunit
protein.
Length = 445
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +2
Query: 17 RWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
R+ +A E+S L +P+ GY L + + R K +GS + V A
Sbjct: 246 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYV 298
Query: 197 PGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYM 334
P D +DP A T + L + +A+ P+++ L S+ M
Sbjct: 299 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 344
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta polypeptide
protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.26
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +2
Query: 17 RWAEALREISGRLAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
R+ +A E+S L +P+ GY L + + R K +GS + V A
Sbjct: 310 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYV 362
Query: 197 PGGDFSDPVTAATLGIVXVFWGLDKKLAQRKHXPSINWLI*YSKYM 334
P D +DP A T + L + +A+ P+++ L S+ M
Sbjct: 363 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM 408
>AL360230-1|CAH73145.1| 255|Homo sapiens novel protein, possible
ortholog of mouse C1q-like protein (gliacolin) protein.
Length = 255
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -2
Query: 276 SFLSSPQNTCTMPSVAAVTG--SEKSPPGGDXAPTMDXEPSRSGLP 145
+F+ P+ P A G E PPG P EP R GLP
Sbjct: 57 TFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLP 102
>AL353576-1|CAH72610.1| 255|Homo sapiens novel protein, possible
ortholog of mouse C1q-like protein (gliacolin) protein.
Length = 255
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -2
Query: 276 SFLSSPQNTCTMPSVAAVTG--SEKSPPGGDXAPTMDXEPSRSGLP 145
+F+ P+ P A G E PPG P EP R GLP
Sbjct: 57 TFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLP 102
>X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for
alpha-1 chain of collagen IV N-terminus. ).
Length = 944
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 23 AEALREISGR--LAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
A+ L I+G+ L +P G P G F G + +G P + GS VGA
Sbjct: 847 AQGLPGITGQSGLPGLPGQQGAPGIPG-----FPGSKGEMGVMGTPGQPGSPGPVGAPGL 901
Query: 197 PG--GDFSDPVTAATLG 241
PG GD P ++ G
Sbjct: 902 PGEKGDHGFPGSSGPRG 918
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 23 AEALREISGR--LAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
A+ L I+G+ L +P G P G F G + +G P + GS VGA
Sbjct: 847 AQGLPGITGQSGLPGLPGQQGAPGIPG-----FPGSKGEMGVMGTPGQPGSPGPVGAPGL 901
Query: 197 PG--GDFSDPVTAATLG 241
PG GD P ++ G
Sbjct: 902 PGEKGDHGFPGSSGPRG 918
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 23 AEALREISGR--LAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
A+ L I+G+ L +P G P G F G + +G P + GS VGA
Sbjct: 847 AQGLPGITGQSGLPGLPGQQGAPGIPG-----FPGSKGEMGVMGTPGQPGSPGPVGAPGL 901
Query: 197 PG--GDFSDPVTAATLG 241
PG GD P ++ G
Sbjct: 902 PGEKGDHGFPGSSGPRG 918
>BC117698-1|AAI17699.1| 1358|Homo sapiens NWD1 protein protein.
Length = 1358
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 182 GAXSPPGGDFSDPVTAATLGIVXVFWGLDKKL 277
G PPGG ++ GI + WG+++KL
Sbjct: 645 GFLQPPGGPLRATLSGCHKGITAMAWGVEEKL 676
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 23 AEALREISGR--LAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
A+ L I+G+ L +P G P G F G + +G P + GS VGA
Sbjct: 253 AQGLPGITGQSGLPGLPGQQGAPGIPG-----FPGSKGEMGVMGTPGQPGSPGPVGAPGL 307
Query: 197 PG--GDFSDPVTAATLG 241
PG GD P ++ G
Sbjct: 308 PGEKGDHGFPGSSGPRG 324
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 23 AEALREISGR--LAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
A+ L I+G+ L +P G P G F G + +G P + GS VGA
Sbjct: 847 AQGLPGITGQSGLPGLPGQQGAPGIPG-----FPGSKGEMGVMGTPGQPGSPGPVGAPGL 901
Query: 197 PG--GDFSDPVTAATLG 241
PG GD P ++ G
Sbjct: 902 PGEKGDHGFPGSSGPRG 918
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 28.3 bits (60), Expect = 9.9
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 23 AEALREISGR--LAEMPADSGYPAYLGARLASFYXRAGRVKCLGNPDREGSXSIVGAXSP 196
A+ L I+G+ L +P G P G F G + +G P + GS VGA
Sbjct: 847 AQGLPGITGQSGLPGLPGQQGAPGIPG-----FPGSKGEMGVMGTPGQPGSPGPVGAPGL 901
Query: 197 PG--GDFSDPVTAATLG 241
PG GD P ++ G
Sbjct: 902 PGEKGDHGFPGSSGPRG 918
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,723,513
Number of Sequences: 237096
Number of extensions: 575144
Number of successful extensions: 2239
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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