Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2326
(400 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 209 7e-55
03_01_0547 + 4093196-4093657,4094267-4095148 209 7e-55
03_01_0544 + 4082528-4082989,4083585-4084466 209 7e-55
03_01_0543 + 4076981-4077442,4078145-4079026 209 7e-55
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 126 5e-30
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 126 5e-30
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 83 1e-16
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 82 2e-16
02_04_0462 + 23131433-23132836 69 1e-12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 69 2e-12
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 50 5e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 50 9e-07
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 47 6e-06
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 45 3e-05
03_05_0511 + 25056018-25059107 44 4e-05
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 43 8e-05
02_04_0148 - 20198407-20201424 41 4e-04
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 38 0.003
04_01_0103 + 1082077-1082167,1083037-1085477 36 0.012
02_04_0017 + 18937774-18937864,18938505-18940945 36 0.012
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 36 0.016
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 35 0.021
01_06_0662 + 30987187-30987277,30987825-30990214 33 0.083
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 29 0.21
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 31 0.34
02_05_0564 + 30003817-30005778 28 2.4
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 3.1
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 27 4.1
05_01_0486 - 4047055-4049013 27 4.1
02_05_1082 - 33976038-33978035 27 4.1
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 27 4.1
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 27 7.2
07_01_1023 + 8840754-8842988,8843189-8843362 26 9.5
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 209 bits (510), Expect = 7e-55
Identities = 99/115 (86%), Positives = 101/115 (87%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 207 DKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
DKL AERERGITIDIALWKFET+K Y T IDAPGHRDF NMITGTS ADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 209 bits (510), Expect = 7e-55
Identities = 99/115 (86%), Positives = 101/115 (87%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 207 DKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
DKL AERERGITIDIALWKFET+K Y T IDAPGHRDF NMITGTS ADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 209 bits (510), Expect = 7e-55
Identities = 99/115 (86%), Positives = 101/115 (87%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 207 DKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
DKL AERERGITIDIALWKFET+K Y T IDAPGHRDF NMITGTS ADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 209 bits (510), Expect = 7e-55
Identities = 99/115 (86%), Positives = 101/115 (87%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR I +FE EA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 207 DKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
DKL AERERGITIDIALWKFET+K Y T IDAPGHRDF NMITGTS ADCAVLI
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 126 bits (305), Expect = 5e-30
Identities = 55/113 (48%), Positives = 79/113 (69%)
Frame = +3
Query: 42 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXA 221
+ +N+ ++GHVDSGKST +G L++ G I K+ + K E EA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 222 ERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
ERERG+T+ +A+ ET K V +D+PGH+DF NMI+G + AD A+L+ A
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDA 358
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 126 bits (305), Expect = 5e-30
Identities = 55/113 (48%), Positives = 79/113 (69%)
Frame = +3
Query: 42 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXA 221
+ +N+ ++GHVDSGKST +G L++ G I K+ + K E EA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 222 ERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
ERERG+T+ +A+ ET K V +D+PGH+DF NMI+G + AD A+L+ A
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDA 358
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 82.6 bits (195), Expect = 1e-16
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Frame = +3
Query: 75 DSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERERGITIDIA 254
D+GKST G +++ G +D R I K+E EA++ + S+ A+++D ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 255 LWKFETSKXYVTXIDAP----GHRDFFXNMITGTSXADCAVLIXXAGXAECE 398
FET T +DAP GH+ + NMI+G S AD VL+ A E E
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFE 115
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 81.8 bits (193), Expect = 2e-16
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +3
Query: 171 MGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSX 350
+GKGSF YAW +D+ ERERGIT+ + + F+T +V +D+PGH+DF NMI+G +
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 351 ADCAVLIXXAGXAECE 398
+D A+L+ A E
Sbjct: 336 SDAAILVIDASIGSFE 351
>02_04_0462 + 23131433-23132836
Length = 467
Score = 69.3 bits (162), Expect = 1e-12
Identities = 40/116 (34%), Positives = 56/116 (48%)
Frame = +3
Query: 24 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWV 203
K + K H+NI IGHVD GK+T T L + K++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 204 LDKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
+D ER RGITI+ A ++ET + +D PGH D+ NMITG + D A+L+
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILV 163
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 68.5 bits (160), Expect = 2e-12
Identities = 43/116 (37%), Positives = 58/116 (50%)
Frame = +3
Query: 33 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDK 212
+ K H+N+ IGHVD GK+T T I K EA GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTA------------AITKVLAEA---GKAKAVAFDEIDK 107
Query: 213 LXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
E+ RGITI A ++ET+K + +D PGH D+ NMITG + D +L+ A
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSA 163
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 50.4 bits (115), Expect = 5e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +3
Query: 231 RGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXAGXAECE 398
+G T+++ FET T +DAPGH+ + NMI+G S AD VL+ A E E
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFE 70
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 49.6 bits (113), Expect = 9e-07
Identities = 35/107 (32%), Positives = 49/107 (45%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
NI + H+DSGK+T T ++Y G I E E+ +G +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIH---------EIHEV-RGRDGVGAKMDSMDLERE 119
Query: 231 RGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
+GITI A + V ID PGH DF + D A+L+
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILV 166
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 46.8 bits (106), Expect = 6e-06
Identities = 32/111 (28%), Positives = 46/111 (41%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
N+ VI HVD GK+T L+ +CG + +D + ERE
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSISLERE 106
Query: 231 RGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXAG 383
RGITI + + + +D PGH DF + + AVL+ AG
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAG 157
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 44.8 bits (101), Expect = 3e-05
Identities = 34/108 (31%), Positives = 53/108 (49%)
Frame = +3
Query: 45 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAE 224
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W + E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDW----MEQE 150
Query: 225 RERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVL 368
+ERGITI +K + ID PGH DF + D A++
Sbjct: 151 QERGITITSPPTTAFWNKHRINIIDTPGHVDFTLEVERALRVLDGAIM 198
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 44.0 bits (99), Expect = 4e-05
Identities = 30/110 (27%), Positives = 47/110 (42%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
N ++ HVD GK+T HL+ CG + G ++ +D L E+
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 231 RGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
R IT+ A V ID+PGH DF + + +D A+++ A
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDA 108
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 43.2 bits (97), Expect = 8e-05
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
N +I H+D GKST L+ G + KR EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 231 RGITIDIALWKFE---TSKXY-VTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
RGITI + + + Y + ID PGH DF + + + A+L+ A
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDA 176
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 40.7 bits (91), Expect = 4e-04
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
N ++ HVD GK++ HLI G E E GS A V+D L E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 231 RGITI---DIALWK--FETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
R IT+ IAL + + V ID+PGH DF + AD A+++ A
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDA 120
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 37.9 bits (84), Expect = 0.003
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
N +I HVD GKST L+ G I K G G +Y LDKL ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 231 RGITI--DIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXAD 356
RGIT+ A + + + D P + N+I D
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVD 146
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 35.9 bits (79), Expect = 0.012
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKR---XIXKFEXEAQEMGKG-SFKY 194
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 195 AWVLDKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
+ L E ++ + + + ++ + ID+PGH DF + D A+++
Sbjct: 73 TGI--SLFYEMS-DESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVV 128
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 35.9 bits (79), Expect = 0.012
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKR---XIXKFEXEAQEMGKG-SFKY 194
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 195 AWVLDKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLI 371
+ L E ++ + + + ++ + ID+PGH DF + D A+++
Sbjct: 73 TGI--SLFYEMS-DESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVV 128
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 35.5 bits (78), Expect = 0.016
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
M K+ N+ VI HVD GKST T L+ G I AQ++ G + +
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGII-----------AQDVA-GDVR---MT 57
Query: 207 DKLXAERERGITI------------DIALWKFETSK----XYVTXIDAPGHRDFFXNMIT 338
D E ERGITI D AL FE + + ID+PGH DF +
Sbjct: 58 DTRADEAERGITIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTA 117
Query: 339 GTSXADCAVLI 371
D A+++
Sbjct: 118 ALRITDGALVV 128
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 35.1 bits (77), Expect = 0.021
Identities = 26/90 (28%), Positives = 37/90 (41%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
NI ++ HVD GK+T ++ + + + QE ++D ERE
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA------KVFRDNQVVQER---------IMDSNDLERE 165
Query: 231 RGITIDIALWKFETSKXYVTXIDAPGHRDF 320
RGITI + ID PGH DF
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGHSDF 195
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 33.1 bits (72), Expect = 0.083
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
M K+ N+ V+ HVD GKST T L+ G I AQ++ G + +
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGII-----------AQDVA-GDVR---MT 57
Query: 207 DKLXAERERGITI---DIALW---KFETSKXY----------VTXIDAPGHRDFFXNMIT 338
D E ERGITI I+L+ E+ K Y + ID+PGH DF +
Sbjct: 58 DSRSDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTA 117
Query: 339 GTSXADCAVLI 371
D A+++
Sbjct: 118 ALRITDGALVV 128
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.1 bits (62), Expect(2) = 0.21
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 174 GKGSFKYAWVLDKLXAERERGITIDIALWKFET-SKXYVTXIDAPGHRDFFXNMITGTSX 350
GK S + + A+ GIT I + E S +T +D PGH F G +
Sbjct: 209 GKTSLLDSLRQTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAV 268
Query: 351 ADCAVLIXXA 380
D VL+ A
Sbjct: 269 TDIVVLVVAA 278
Score = 21.4 bits (43), Expect(2) = 0.21
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +3
Query: 54 IVVIGHVDSGKST 92
+ ++GHVD GK++
Sbjct: 200 VTIMGHVDHGKTS 212
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 31.1 bits (67), Expect = 0.34
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Frame = +3
Query: 51 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVLDKLXAERE 230
N+ ++GH+ GK+ L+ + +D F+ E + ++ D E+E
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDT-----FDSEGE-------RHVRFTDTRVDEQE 197
Query: 231 RGITIDIA----LWKFETSKXYVTXI-DAPGHRDFFXNMITGTSXADCAVLIXXA 380
R ++I + + K Y+ I D PGH +F M AD AVL+ A
Sbjct: 198 RRVSIKAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDA 252
>02_05_0564 + 30003817-30005778
Length = 653
Score = 28.3 bits (60), Expect = 2.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 135 VCQYLHICRSNDQWWW 88
V Y+H+C + +WWW
Sbjct: 564 VLTYMHLCAEDWRWWW 579
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 39 KTHINIVVIGHVDSG 83
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 282 YVTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
+V+ +D PGH M+ G + D A+L+ A
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>05_01_0486 - 4047055-4049013
Length = 652
Score = 27.5 bits (58), Expect = 4.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 135 VCQYLHICRSNDQWWW 88
V Y+H+C + +WWW
Sbjct: 563 VLTYMHLCVEDWKWWW 578
>02_05_1082 - 33976038-33978035
Length = 665
Score = 27.5 bits (58), Expect = 4.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 135 VCQYLHICRSNDQWWW 88
V Y+H+C + +WWW
Sbjct: 576 VLTYMHLCVEDWKWWW 591
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 294 IDAPGHRDFFXNMITGTSXADCAVLI 371
ID PGH+ F G+S D A+L+
Sbjct: 490 IDTPGHQSFSNLRTRGSSLCDIAILV 515
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 294 IDAPGHRDFFXNMITGTSXADCAVLI 371
ID PGH F G+S D A+L+
Sbjct: 767 IDTPGHESFSNLRSRGSSLCDIAILV 792
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 362 SAISXRGSCDHVPEEISVXRSINXGNIXLASFELPESNID 243
S+IS G C+ S N N +S +LPE ID
Sbjct: 138 SSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLPEETID 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,749,775
Number of Sequences: 37544
Number of extensions: 137980
Number of successful extensions: 307
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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