Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2325
(374 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 167 8e-42
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 167 1e-41
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 167 1e-41
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 167 1e-41
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 167 1e-41
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 31 1.6
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 30 2.1
BC041130-1|AAH41130.1| 889|Homo sapiens FCH domain only 1 protein. 29 4.9
BC028021-1|AAH28021.1| 891|Homo sapiens FCHO1 protein protein. 29 4.9
AB006628-1|BAA22959.1| 906|Homo sapiens KIAA0290 protein. 29 4.9
BC009395-1|AAH09395.1| 452|Homo sapiens IRF3 protein protein. 29 6.5
BC000660-1|AAH00660.1| 452|Homo sapiens IRF3 protein protein. 29 6.5
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 167 bits (407), Expect = 8e-42
Identities = 79/103 (76%), Positives = 88/103 (85%)
Frame = +2
Query: 65 SLSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 244
+++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 245 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 115
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++VARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 167 bits (406), Expect = 1e-41
Identities = 79/102 (77%), Positives = 87/102 (85%)
Frame = +2
Query: 68 LSVARPLXSVYSEKXETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 247
++ ARPL SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 248 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 373
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 101
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
protein.
Length = 1907
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 197 SMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGGR 370
++++ +RQP + AG A +W TG A A P V GG S + GGR
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPTRGWGAGGR 218
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 64 ESIGSPTFXVGVFREXRDGAGCSQAPPVRVQGAHTS 171
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
>BC041130-1|AAH41130.1| 889|Homo sapiens FCH domain only 1 protein.
Length = 889
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 363 PRHMLPKAP*PDLWVPPPRTRGIRATARP 277
PR P++P P PPP RGIRA P
Sbjct: 494 PRPGTPQSP-PSCRAPPPEARGIRAPPLP 521
>BC028021-1|AAH28021.1| 891|Homo sapiens FCHO1 protein protein.
Length = 891
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 363 PRHMLPKAP*PDLWVPPPRTRGIRATARP 277
PR P++P P PPP RGIRA P
Sbjct: 494 PRPGTPQSP-PSCRAPPPEARGIRAPPLP 521
>AB006628-1|BAA22959.1| 906|Homo sapiens KIAA0290 protein.
Length = 906
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 363 PRHMLPKAP*PDLWVPPPRTRGIRATARP 277
PR P++P P PPP RGIRA P
Sbjct: 511 PRPGTPQSP-PSCRAPPPEARGIRAPPLP 538
>BC009395-1|AAH09395.1| 452|Homo sapiens IRF3 protein protein.
Length = 452
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 97 VFREXRDGAGCSQAPPVRVQGAHTSGPGQ*C 189
V +E RDG GC+ P QG +GPG+ C
Sbjct: 363 VDQEARDGQGCAHVP----QGLGRNGPGRGC 389
>BC000660-1|AAH00660.1| 452|Homo sapiens IRF3 protein protein.
Length = 452
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 97 VFREXRDGAGCSQAPPVRVQGAHTSGPGQ*C 189
V +E RDG GC+ P QG +GPG+ C
Sbjct: 363 VDQEARDGQGCAHVP----QGLGRNGPGRGC 389
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,545,217
Number of Sequences: 237096
Number of extensions: 1323285
Number of successful extensions: 3229
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3214
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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