Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2318
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457393-1|CAG33674.1| 170|Homo sapiens LOC55954 protein. 56 1e-07
CR456353-1|CAG30239.1| 170|Homo sapiens Em:AC005529.5 protein. 56 1e-07
BC009717-1|AAH09717.1| 170|Homo sapiens zinc finger, matrin typ... 56 1e-07
AL160311-1|CAB77284.1| 170|Homo sapiens hypothetical protein pr... 56 1e-07
BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/H... 33 1.1
BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein. 33 1.1
AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens ... 33 1.1
Y18064-1|CAA77022.1| 890|Homo sapiens wolframin protein. 32 2.5
BC064838-1|AAH64838.1| 482|Homo sapiens makorin, ring finger pr... 32 2.5
BC037400-1|AAH37400.1| 482|Homo sapiens makorin, ring finger pr... 32 2.5
BC025955-1|AAH25955.1| 482|Homo sapiens makorin, ring finger pr... 32 2.5
AM236048-1|CAJ84705.1| 329|Homo sapiens makorin-1 protein. 32 2.5
AF192793-1|AAF18979.1| 482|Homo sapiens makorin 1 protein. 32 2.5
AF192784-1|AAF17487.1| 482|Homo sapiens makorin 1 protein. 32 2.5
AF117233-1|AAF17214.1| 328|Homo sapiens znf-xp protein protein. 32 2.5
AF084481-1|AAC64943.1| 890|Homo sapiens transmembrane protein p... 32 2.5
AB209298-1|BAD92535.1| 409|Homo sapiens makorin, ring finger pr... 32 2.5
BC030130-1|AAH30130.1| 890|Homo sapiens WFS1 protein protein. 31 3.3
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 31 5.8
>CR457393-1|CAG33674.1| 170|Homo sapiens LOC55954 protein.
Length = 170
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRF-MSGNCSFGPICRYSHYTKEE 292
K H GL+H K Y ++D I+L+E K C +F ++G C FG CR+SH ++ +
Sbjct: 22 KKHLNGLQHLKAKKVWYDMFRDAAAILLDEQNKRPCRKFLLTGQCDFGSNCRFSHMSERD 81
Query: 293 LDNLNL 310
L L++
Sbjct: 82 LQELSI 87
>CR456353-1|CAG30239.1| 170|Homo sapiens Em:AC005529.5 protein.
Length = 170
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRF-MSGNCSFGPICRYSHYTKEE 292
K H GL+H K Y ++D I+L+E K C +F ++G C FG CR+SH ++ +
Sbjct: 22 KKHLNGLQHLKAKKVWYDMFRDAAAILLDEQNKRPCRKFLLTGQCDFGSNCRFSHMSERD 81
Query: 293 LDNLNL 310
L L++
Sbjct: 82 LQELSI 87
>BC009717-1|AAH09717.1| 170|Homo sapiens zinc finger, matrin type 5
protein.
Length = 170
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRF-MSGNCSFGPICRYSHYTKEE 292
K H GL+H K Y ++D I+L+E K C +F ++G C FG CR+SH ++ +
Sbjct: 22 KKHLNGLQHLKAKKVWYDMFRDAAAILLDEQNKRPCRKFLLTGQCDFGSNCRFSHMSERD 81
Query: 293 LDNLNL 310
L L++
Sbjct: 82 LQELSI 87
>AL160311-1|CAB77284.1| 170|Homo sapiens hypothetical protein
protein.
Length = 170
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRF-MSGNCSFGPICRYSHYTKEE 292
K H GL+H K Y ++D I+L+E K C +F ++G C FG CR+SH ++ +
Sbjct: 22 KKHLNGLQHLKAKKVWYDMFRDAAAILLDEQNKRPCRKFLLTGQCDFGSNCRFSHMSERD 81
Query: 293 LDNLNL 310
L L++
Sbjct: 82 LQELSI 87
>BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/His)
box polypeptide 57 protein.
Length = 1386
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 131 GLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSH 277
GLE + L + T ++E+ C ++ GNC FG CR+ H
Sbjct: 275 GLELEYLTSRFRKSKPKESTKNVQENSLEICKFYLKGNCKFGSKCRFKH 323
>BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein.
Length = 658
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 131 GLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSH 277
GLE + L + T ++E+ C ++ GNC FG CR+ H
Sbjct: 275 GLELEYLTSRFRKSKPKESTKNVQENSLEICKFYLKGNCKFGSKCRFKH 323
>AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ32861 fis, clone TESTI2003589. ).
Length = 433
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 131 GLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSH 277
GLE + L + T ++E+ C ++ GNC FG CR+ H
Sbjct: 173 GLELEYLTSRFRKSKPKESTKNVQENSLEICKFYLKGNCKFGSKCRFKH 221
>Y18064-1|CAA77022.1| 890|Homo sapiens wolframin protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 274 RVPAYWSERTISTHKSGALNFFTLF*YNSLWIFIFLIVFMYQFLMFQSFIVC 119
R +W I TH AL FF + ++ F F I + +L F S ++C
Sbjct: 309 RAGMHWLSTIIPTHHINALIFFFIISNLTIDFFAFFIPLVIFYLSFISMVIC 360
>BC064838-1|AAH64838.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSH 79
>BC037400-1|AAH37400.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSH 79
>BC025955-1|AAH25955.1| 482|Homo sapiens makorin, ring finger
protein, 1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSH 79
>AM236048-1|CAJ84705.1| 329|Homo sapiens makorin-1 protein.
Length = 329
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSH 79
>AF192793-1|AAF18979.1| 482|Homo sapiens makorin 1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSH 79
>AF192784-1|AAF17487.1| 482|Homo sapiens makorin 1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSH 79
>AF117233-1|AAF17214.1| 328|Homo sapiens znf-xp protein protein.
Length = 328
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 56 TKQVTCRYFMHGVCKEGDNCRYSH 79
>AF084481-1|AAC64943.1| 890|Homo sapiens transmembrane protein
protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 274 RVPAYWSERTISTHKSGALNFFTLF*YNSLWIFIFLIVFMYQFLMFQSFIVC 119
R +W I TH AL FF + ++ F F I + +L F S ++C
Sbjct: 309 RAGMHWLSTIIPTHHINALIFFFIISNLTIDFFAFFIPLVIFYLSFISMVIC 360
>AB209298-1|BAD92535.1| 409|Homo sapiens makorin, ring finger
protein, 1 variant protein.
Length = 409
Score = 31.9 bits (69), Expect = 2.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 SKKIQCTRFMSGNCSFGPICRYSH 277
+K++ C FM G C G CRYSH
Sbjct: 53 TKQVTCRYFMHGVCKEGDNCRYSH 76
>BC030130-1|AAH30130.1| 890|Homo sapiens WFS1 protein protein.
Length = 890
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 274 RVPAYWSERTISTHKSGALNFFTLF*YNSLWIFIFLIVFMYQFLMFQSFIVC 119
R +W I TH AL FF + ++ F F I + +L F S ++C
Sbjct: 309 RAGMHWLSTIIPTHHINALIFFFIVSNLTIDFFAFFIPLVIFYLSFISMVIC 360
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 170 EYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSHYTKEELDNLNL 310
E KDP + + C FM GNC++G CR+ H + N +L
Sbjct: 209 EVKDPSD--RKVRPRPTCRFFMKGNCTWGMNCRFIHPGVNDKGNYSL 253
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,110,087
Number of Sequences: 237096
Number of extensions: 2223284
Number of successful extensions: 4170
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4163
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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