Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2318
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022342-1|AAY54758.1|   87|Drosophila melanogaster IP04495p pro...    55   1e-07
BT022314-1|AAY54730.1|  136|Drosophila melanogaster IP04595p pro...    55   1e-07
BT022286-1|AAY54702.1|  136|Drosophila melanogaster IP04695p pro...    55   1e-07
BT022262-1|AAY54678.1|  136|Drosophila melanogaster IP04795p pro...    55   1e-07
AE014134-220|AAN10481.1|  139|Drosophila melanogaster CG31922-PA...    55   1e-07
AY052027-1|AAK93451.1|  387|Drosophila melanogaster LD47649p pro...    31   1.3  
AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm prot...    31   1.3  
AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD...    31   1.3  
BT003443-1|AAO39446.1|  198|Drosophila melanogaster RH63179p pro...    31   2.2  
AF119710-1|AAD22044.1|  262|Drosophila melanogaster RAD201 protein.    31   2.2  
AE013599-814|AAF58972.1|  180|Drosophila melanogaster CG8016-PA ...    31   2.2  
AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p pro...    30   2.9  
AE014298-2049|AAF48384.1|  210|Drosophila melanogaster CG5334-PA...    30   2.9  
AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA...    30   2.9  
AY113336-1|AAM29341.1|  404|Drosophila melanogaster AT31705p pro...    29   6.8  
AY060945-1|AAL28493.1|  404|Drosophila melanogaster GM08440p pro...    29   6.8  
AY058694-1|AAL13923.1|  386|Drosophila melanogaster LD41384p pro...    29   6.8  
AF192794-1|AAF17486.1|  386|Drosophila melanogaster makorin 1 pr...    29   6.8  
AF192788-1|AAF17491.1|  386|Drosophila melanogaster makorin 1 pr...    29   6.8  
AE014296-3567|AAN12178.1|  386|Drosophila melanogaster CG7184-PB...    29   6.8  
AE014296-3566|AAF51740.2|  386|Drosophila melanogaster CG7184-PA...    29   6.8  
AE013599-679|AAF59063.1|  404|Drosophila melanogaster CG8635-PA ...    29   6.8  

>BT022342-1|AAY54758.1|   87|Drosophila melanogaster IP04495p
           protein.
          Length = 87

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +2

Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSHYTKEEL 295
           K HN G+ H      + + Y+DP+ I+ EE +K  C R+    C F   C+++HY+ + L
Sbjct: 20  KLHNGGIAHAIAKSNYLKRYEDPKKILTEERQKTPCKRYFGSYCKFETYCKFTHYSGDNL 79

Query: 296 DNL 304
             L
Sbjct: 80  REL 82


>BT022314-1|AAY54730.1|  136|Drosophila melanogaster IP04595p
           protein.
          Length = 136

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +2

Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSHYTKEEL 295
           K HN G+ H      + + Y+DP+ I+ EE +K  C R+    C F   C+++HY+ + L
Sbjct: 20  KLHNGGIAHAIAKSNYLKRYEDPKKILTEERQKTPCKRYFGSYCKFETYCKFTHYSGDNL 79

Query: 296 DNL 304
             L
Sbjct: 80  REL 82


>BT022286-1|AAY54702.1|  136|Drosophila melanogaster IP04695p
           protein.
          Length = 136

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +2

Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSHYTKEEL 295
           K HN G+ H      + + Y+DP+ I+ EE +K  C R+    C F   C+++HY+ + L
Sbjct: 20  KLHNGGIAHAIAKSNYLKRYEDPKKILTEERQKTPCKRYFGSYCKFETYCKFTHYSGDNL 79

Query: 296 DNL 304
             L
Sbjct: 80  REL 82


>BT022262-1|AAY54678.1|  136|Drosophila melanogaster IP04795p
           protein.
          Length = 136

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +2

Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSHYTKEEL 295
           K HN G+ H      + + Y+DP+ I+ EE +K  C R+    C F   C+++HY+ + L
Sbjct: 20  KLHNGGIAHAIAKSNYLKRYEDPKKILTEERQKTPCKRYFGSYCKFETYCKFTHYSGDNL 79

Query: 296 DNL 304
             L
Sbjct: 80  REL 82


>AE014134-220|AAN10481.1|  139|Drosophila melanogaster CG31922-PA
           protein.
          Length = 139

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +2

Query: 116 KTHNKGLEHQKLVHEHYQEYKDPETIILEESKKIQCTRFMSGNCSFGPICRYSHYTKEEL 295
           K HN G+ H      + + Y+DP+ I+ EE +K  C R+    C F   C+++HY+ + L
Sbjct: 23  KLHNGGIAHAIAKSNYLKRYEDPKKILTEERQKTPCKRYFGSYCKFETYCKFTHYSGDNL 82

Query: 296 DNL 304
             L
Sbjct: 83  REL 85


>AY052027-1|AAK93451.1|  387|Drosophila melanogaster LD47649p
           protein.
          Length = 387

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 221 CTRFMSGNCSFGPICRYSHYTKEEL 295
           C +FM G+C+ G  C+Y H  K+ L
Sbjct: 363 CKQFMRGHCNMGKNCKYVHPQKKRL 387


>AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm protein
            protein.
          Length = 1135

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 221  CTRFMSGNCSFGPICRYSHYTKEEL 295
            C +FM G+C+ G  C+Y H  K+ L
Sbjct: 1111 CKQFMRGHCNMGKNCKYVHPQKKRL 1135


>AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD,
            isoform D protein.
          Length = 1135

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 221  CTRFMSGNCSFGPICRYSHYTKEEL 295
            C +FM G+C+ G  C+Y H  K+ L
Sbjct: 1111 CKQFMRGHCNMGKNCKYVHPQKKRL 1135


>BT003443-1|AAO39446.1|  198|Drosophila melanogaster RH63179p
           protein.
          Length = 198

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 197 LEESKKIQCTRFMSGNCSFGPICRYSHYTKEELD 298
           L+  +KI C  F  G C FG  C+Y+H +   +D
Sbjct: 108 LKNGRKI-CWNFRRGRCRFGTSCQYAHDSDLSVD 140


>AF119710-1|AAD22044.1|  262|Drosophila melanogaster RAD201 protein.
          Length = 262

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 197 LEESKKIQCTRFMSGNCSFGPICRYSHYTKEELD 298
           L+  +KI C  F  G C FG  C+Y+H +   +D
Sbjct: 90  LKNGRKI-CWNFRRGRCRFGTSCQYAHDSDLSVD 122


>AE013599-814|AAF58972.1|  180|Drosophila melanogaster CG8016-PA
           protein.
          Length = 180

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 197 LEESKKIQCTRFMSGNCSFGPICRYSHYTKEELD 298
           L+  +KI C  F  G C FG  C+Y+H +   +D
Sbjct: 90  LKNGRKI-CWNFRRGRCRFGTSCQYAHDSDLSVD 122


>AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p
           protein.
          Length = 1288

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +2

Query: 197 LEESKK--IQCTRF-MSGNCSFGPICRYSHYTKEELDN 301
           L++ KK  ++C  F   G C +GP CR++H  ++  ++
Sbjct: 241 LDKKKKPPLRCRNFDRDGTCKYGPKCRFAHLPQQPTES 278


>AE014298-2049|AAF48384.1|  210|Drosophila melanogaster CG5334-PA
           protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 221 CTRFMSGNCSFGPICRYSHYTKEELDNL 304
           C   + GNC F  +CRYSH   +  DNL
Sbjct: 12  CRYRLRGNCRFDDLCRYSHDVLQN-DNL 38


>AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA
           protein.
          Length = 1288

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = +2

Query: 197 LEESKK--IQCTRF-MSGNCSFGPICRYSHYTKEELDN 301
           L++ KK  ++C  F   G C +GP CR++H  ++  ++
Sbjct: 241 LDKKKKPPLRCRNFDRDGTCKYGPKCRFAHLPQQPTES 278


>AY113336-1|AAM29341.1|  404|Drosophila melanogaster AT31705p
           protein.
          Length = 404

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 203 ESKKIQCTRFMSGNCSFGPICRYSHYTKEE 292
           + K + C  F  G C+ G  C++SH   +E
Sbjct: 94  DPKSVVCAFFKQGTCTKGDKCKFSHDLSQE 123


>AY060945-1|AAL28493.1|  404|Drosophila melanogaster GM08440p
           protein.
          Length = 404

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 203 ESKKIQCTRFMSGNCSFGPICRYSHYTKEE 292
           + K + C  F  G C+ G  C++SH   +E
Sbjct: 94  DPKSVVCAFFKQGTCTKGDKCKFSHDLSQE 123


>AY058694-1|AAL13923.1|  386|Drosophila melanogaster LD41384p
           protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 CTRFMSGNCSFGPICRYSH 277
           C  ++ G C FG +CR+SH
Sbjct: 23  CRYYVRGICRFGELCRFSH 41


>AF192794-1|AAF17486.1|  386|Drosophila melanogaster makorin 1
           protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 CTRFMSGNCSFGPICRYSH 277
           C  ++ G C FG +CR+SH
Sbjct: 23  CRYYVRGICRFGELCRFSH 41


>AF192788-1|AAF17491.1|  386|Drosophila melanogaster makorin 1
           protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 CTRFMSGNCSFGPICRYSH 277
           C  ++ G C FG +CR+SH
Sbjct: 23  CRYYVRGICRFGELCRFSH 41


>AE014296-3567|AAN12178.1|  386|Drosophila melanogaster CG7184-PB,
           isoform B protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 CTRFMSGNCSFGPICRYSH 277
           C  ++ G C FG +CR+SH
Sbjct: 23  CRYYVRGICRFGELCRFSH 41


>AE014296-3566|AAF51740.2|  386|Drosophila melanogaster CG7184-PA,
           isoform A protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 221 CTRFMSGNCSFGPICRYSH 277
           C  ++ G C FG +CR+SH
Sbjct: 23  CRYYVRGICRFGELCRFSH 41


>AE013599-679|AAF59063.1|  404|Drosophila melanogaster CG8635-PA
           protein.
          Length = 404

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 203 ESKKIQCTRFMSGNCSFGPICRYSHYTKEE 292
           + K + C  F  G C+ G  C++SH   +E
Sbjct: 94  DPKSVVCAFFKQGTCTKGDKCKFSHDLSQE 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,220,448
Number of Sequences: 53049
Number of extensions: 653727
Number of successful extensions: 1646
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)