Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2316
         (657 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   6.4  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   6.4  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   6.4  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   6.4  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 225 HQTLDGLLINRQLWLAEGLLSCQTKG 302
           H   DGLL  R L + EGL   Q  G
Sbjct: 128 HDQDDGLLDERYLEVLEGLKEAQAAG 153


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 288 CQTKGGRYCGY 320
           C++ G RYCGY
Sbjct: 32  CKSIGARYCGY 42


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 43  FFDEYDYYNFDHDKHIFTGHGG 108
           F D +D+++F+  +H+ T  GG
Sbjct: 64  FEDNFDFFDFEKWEHVNTLAGG 85


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 43  FFDEYDYYNFDHDKHIFTGHGG 108
           F D +D+++F+  +H+ T  GG
Sbjct: 64  FEDNFDFFDFEKWEHVNTLAGG 85


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,481
Number of Sequences: 2352
Number of extensions: 13096
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)