Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2315
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA...    29   6.9  
AY047500-1|AAK77232.1|  607|Drosophila melanogaster GH01133p pro...    29   9.1  
AE014297-3831|AAF56488.1|  607|Drosophila melanogaster CG5053-PA...    29   9.1  

>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
           protein.
          Length = 1399

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
 Frame = +1

Query: 4   SAVPKSRRGTCYDLVLSVLSWILSPWTRPVSI--NHGAYS 117
           SAVP  R+ + YD VLS+  + +   T+PVSI  ++G +S
Sbjct: 50  SAVPPLRQRSSYDSVLSLDRFTVVETTQPVSIRASYGPFS 89


>AY047500-1|AAK77232.1|  607|Drosophila melanogaster GH01133p
           protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 18/86 (20%), Positives = 38/86 (44%)
 Frame = +1

Query: 139 NKTLPLLIRNAQSVGSHRSVLKQP*PAWTPPKCTDVNMCCGRRRICTGSSPAETSSCRKR 318
           N   P L +   ++ ++ +++  P P   PP   +  MC G+R   + +     +S    
Sbjct: 273 NNNSPELYKQTPTISANGALV--PPPYRDPPPPRNSPMCQGQRLASSNADTMSNASSSTN 330

Query: 319 XFHTDFPLC*STTTAPVNMNTEGRDK 396
            F +D+    S  T  +N N++  ++
Sbjct: 331 PFLSDYDQHSSHNTNSINNNSQAMEE 356


>AE014297-3831|AAF56488.1|  607|Drosophila melanogaster CG5053-PA
           protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 18/86 (20%), Positives = 38/86 (44%)
 Frame = +1

Query: 139 NKTLPLLIRNAQSVGSHRSVLKQP*PAWTPPKCTDVNMCCGRRRICTGSSPAETSSCRKR 318
           N   P L +   ++ ++ +++  P P   PP   +  MC G+R   + +     +S    
Sbjct: 273 NNNSPELYKQTPTISANGALV--PPPYRDPPPPRNSPMCQGQRLASSNADTMSNASSSTN 330

Query: 319 XFHTDFPLC*STTTAPVNMNTEGRDK 396
            F +D+    S  T  +N N++  ++
Sbjct: 331 PFLSDYDQHSSHNTNSINNNSQAMEE 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,180,748
Number of Sequences: 53049
Number of extensions: 800926
Number of successful extensions: 1635
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)