Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2314
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.           185   1e-46
U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor...   185   1e-46
BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation ...   185   1e-46
AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.                185   1e-46
M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.                 182   7e-46
BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation ...   132   1e-30
BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.        132   1e-30

>X81625-1|CAA57281.1|  437|Homo sapiens C11 protein protein.
          Length = 437

 Score =  185 bits (450), Expect = 1e-46
 Identities = 91/102 (89%), Positives = 95/102 (93%)
 Frame = +3

Query: 339 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 518
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 519 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYWGTIXTEXG 644
           SRVNRLSVLGAITSVQ RLKLY KVPPNGLV+Y GTI TE G
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEG 105


>U90176-1|AAB49726.1|  437|Homo sapiens eukaryotic release factor 1
           protein.
          Length = 437

 Score =  185 bits (450), Expect = 1e-46
 Identities = 91/102 (89%), Positives = 95/102 (93%)
 Frame = +3

Query: 339 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 518
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 519 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYWGTIXTEXG 644
           SRVNRLSVLGAITSVQ RLKLY KVPPNGLV+Y GTI TE G
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEG 105


>BC088358-1|AAH88358.1|  437|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 437

 Score =  185 bits (450), Expect = 1e-46
 Identities = 91/102 (89%), Positives = 95/102 (93%)
 Frame = +3

Query: 339 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 518
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 519 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYWGTIXTEXG 644
           SRVNRLSVLGAITSVQ RLKLY KVPPNGLV+Y GTI TE G
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEG 105


>AF095901-1|AAD43966.1|  437|Homo sapiens eRF1 protein.
          Length = 437

 Score =  185 bits (450), Expect = 1e-46
 Identities = 91/102 (89%), Positives = 95/102 (93%)
 Frame = +3

Query: 339 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 518
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 519 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYWGTIXTEXG 644
           SRVNRLSVLGAITSVQ RLKLY KVPPNGLV+Y GTI TE G
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEG 105


>M75715-1|AAA36665.1|  428|Homo sapiens TB3-1 protein.
          Length = 428

 Score =  182 bits (444), Expect = 7e-46
 Identities = 90/102 (88%), Positives = 94/102 (92%)
 Frame = +3

Query: 339 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTASNIK 518
           + S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTASNIK
Sbjct: 4   DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63

Query: 519 SRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYWGTIXTEXG 644
           SRVNRLSVLGAITSVQ RLKLY KVPPNGL +Y GTI TE G
Sbjct: 64  SRVNRLSVLGAITSVQQRLKLYNKVPPNGLEVYCGTIVTEEG 105


>BT007374-1|AAP36038.1|  404|Homo sapiens eukaryotic translation
           termination factor 1 protein.
          Length = 404

 Score =  132 bits (319), Expect = 1e-30
 Identities = 65/72 (90%), Positives = 67/72 (93%)
 Frame = +3

Query: 429 MISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGL 608
           MISLIIPPKDQISRV+KMLADEFGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGL
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGL 60

Query: 609 VIYWGTIXTEXG 644
           V+Y GTI TE G
Sbjct: 61  VVYCGTIVTEEG 72


>BC014269-1|AAH14269.1|  404|Homo sapiens ETF1 protein protein.
          Length = 404

 Score =  132 bits (319), Expect = 1e-30
 Identities = 65/72 (90%), Positives = 67/72 (93%)
 Frame = +3

Query: 429 MISLIIPPKDQISRVSKMLADEFGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGL 608
           MISLIIPPKDQISRV+KMLADEFGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNGL
Sbjct: 1   MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGL 60

Query: 609 VIYWGTIXTEXG 644
           V+Y GTI TE G
Sbjct: 61  VVYCGTIVTEEG 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,519,593
Number of Sequences: 237096
Number of extensions: 1691628
Number of successful extensions: 3109
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)