Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2307
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like p...    26   0.44 
AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like p...    26   0.44 
AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like p...    26   0.44 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   0.77 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   0.77 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   4.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   4.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    22   7.2  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    22   9.5  

>AY341235-1|AAR13799.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +3

Query: 327 GTYEPNDDECLN---PWRDDTEE 386
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AY341234-1|AAR13798.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +3

Query: 327 GTYEPNDDECLN---PWRDDTEE 386
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AY341232-1|AAR13796.1|  196|Anopheles gambiae transferrin-like
           protein.
          Length = 196

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +3

Query: 327 GTYEPNDDECLN---PWRDDTEE 386
           GTY+  DDE LN   P  DD EE
Sbjct: 143 GTYQATDDEGLNTDSPLEDDAEE 165


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 134 HKSPSCRSDGIPTPECSSANPRLENSSEGVCRH*GQVLQ*STCTRM 271
           H S S  S  +PT   +S  PR   SS    R+  Q+ +     +M
Sbjct: 49  HSSTSASSSSVPTLPTTSGEPRAAGSSSNSRRNSKQLQRDELAAKM 94


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 134 HKSPSCRSDGIPTPECSSANPRLENSSEGVCRH*GQVLQ*STCTRM 271
           H S S  S  +PT   +S  PR   SS    R+  Q+ +     +M
Sbjct: 49  HSSTSASSSSVPTLPTTSGEPRAAGSSSNSRRNSKQLQRDELAAKM 94


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 123 IAAITNRLHAEAMASLPPNVRRRIRALRTLQKEF 224
           + A++NR +  A A       + +R LRT  KEF
Sbjct: 64  LPALSNRHNDNATAEYLSCYYQNVRGLRTKTKEF 97


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 162 ASLPPNVRRRIRALRTLQKE 221
           AS+PPN+   IR  + LQ E
Sbjct: 762 ASIPPNLEEAIRGPQGLQGE 781


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 240 WPQCRQTPSEEFSR 199
           WP CR  P+   SR
Sbjct: 268 WPSCRSPPARRRSR 281


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 127 RPSQI-AFMQKRWHPYPRMFVGES 195
           +P +I  +  K WH + ++F G+S
Sbjct: 168 KPKRIRGWTGKVWHGFKKLFTGDS 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,639
Number of Sequences: 2352
Number of extensions: 7090
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)