Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2298
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    29   0.12 
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    27   0.62 

>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 633 GNKELADTTLQFANEEWAQLMDXLTPSAIKQIVK 734
           G+K L D   QF N+ W  ++  L P+ I    K
Sbjct: 192 GDKALGDNMNQFLNDNWEDILKELKPAIIGAFTK 225



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 209 EFTKGIPXLDXPSTDPVHXDDINI-DGNG 292
           +F  G+P L   S DP+  D+++I  G G
Sbjct: 47  KFQGGVPALGLASLDPLRIDEMDIVQGTG 75


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 633 GNKELADTTLQFANEEWAQLMDXLTPSAIKQI 728
           G K L D+T Q+ N+ W  + + L P   K I
Sbjct: 211 GVKVLEDSTNQYLNDNWRPVSEALKPIIAKTI 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,021
Number of Sequences: 2352
Number of extensions: 8313
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)