Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2296
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    26   1.3  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   1.7  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    24   5.3  
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       23   9.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.2  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +3

Query: 129 TSAAHKAAR-ASSPEWRNEWGS 191
           T  A KA+R AS  +W+NEW +
Sbjct: 896 TETAKKASRQASMRQWQNEWSN 917


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 547 AMSVWLFASVRRVMLL 594
           A++VW FAS+RR M +
Sbjct: 308 ALTVWKFASIRRTMTI 323


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 403 HCVNSKWKMS*SCENV 450
           +C NS+WK S +C  V
Sbjct: 149 NCPNSRWKASITCNKV 164


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +3

Query: 276 DSRKNIRNRDTQRILGILV----VSNIIHK*NEQESDRYILSVLFSSLRKFKMENVVK 437
           DS  +I NR  +R++ +      V+  I   N+   D+Y   V  S  RK  +ENV+K
Sbjct: 42  DSWADIDNRFYERVVELKKKGKKVTVAIGGWNDSAGDKYSRLVRSSQARKRFIENVMK 99


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 129 TSAAHKAARASSPEWRNEWGSKR 197
           +S +H         W  EWGS+R
Sbjct: 113 SSHSHVVIAGDFNAWHTEWGSRR 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,641
Number of Sequences: 2352
Number of extensions: 8875
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)