Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2289
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   110   3e-26
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.6  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    23   6.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.8  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  110 bits (265), Expect = 3e-26
 Identities = 52/85 (61%), Positives = 58/85 (68%)
 Frame = +2

Query: 200 KDVTCXVAYSRIEGDHIVCAAYSHELPRYGVXVGLTNYAAAYSTGLLLAXRLXXRXXXXX 379
           +D+TC +AY RIEGD IVCAAYSHELPRYGV VGLTNYAAAY TGLL+A R+  +     
Sbjct: 58  RDITCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDT 117

Query: 380 XXXXXXXXXXXEYNVEPVDNGPXAF 454
                      EY VEPVD GP AF
Sbjct: 118 LYAGCTDVTGEEYLVEPVDEGPAAF 142



 Score = 81.8 bits (193), Expect = 1e-17
 Identities = 34/43 (79%), Positives = 40/43 (93%)
 Frame = +1

Query: 73  YQVKFKRRREGKTDYYARKRLVVHDKNKYNTPKYRLIXRISNK 201
           YQV+F+RRREGKTDYYARKRL+  DKNKYNTPK+RLI R+SN+
Sbjct: 16  YQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNR 58



 Score = 45.2 bits (102), Expect = 1e-06
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +3

Query: 459 CYLDVGLARTTTGXRXFGALKG 524
           CYLDVGLARTTTG R FGA+KG
Sbjct: 144 CYLDVGLARTTTGSRVFGAMKG 165


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 245  GHLQSESRPXGMLHPLLEIR 186
            G+L S+ RP   L+ +LE+R
Sbjct: 2174 GYLDSQGRPLKSLYLMLELR 2193


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 245  GHLQSESRPXGMLHPLLEIR 186
            G+L S+ RP   L+ +LE+R
Sbjct: 2175 GYLDSQGRPLKSLYLMLELR 2194


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 16/59 (27%), Positives = 23/59 (38%)
 Frame = +3

Query: 372 LTPYTLAQQMSQVMNTMLNLSTMDXEHSTCYLDVGLARTTTGXRXFGALKGCCXXXPXC 548
           LTP   + +M Q+  TML ++T    H    +D  L       R    + G C     C
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHLLEQIDRELEMKAVLARFTTDVIGTCAFGIEC 195


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 284 NVATHVNKQRTQYGHLQSESRPXG 213
           N   +    +T +G ++SES P G
Sbjct: 414 NTQNNAGGNQTPFGQIKSESNPLG 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,328
Number of Sequences: 2352
Number of extensions: 7822
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)